Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 26% ± 8% | |
ciliated cell | 4 studies | 18% ± 2% |
Insufficient scRNA-seq data for expression of PRKAB1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2305.30 | 1445 / 1445 | 100% | 22.43 | 183 / 183 |
kidney | 100% | 6730.34 | 89 / 89 | 100% | 51.99 | 900 / 901 |
thymus | 100% | 2414.04 | 653 / 653 | 100% | 28.42 | 603 / 605 |
lung | 100% | 2852.47 | 578 / 578 | 100% | 29.70 | 1151 / 1155 |
stomach | 100% | 3372.15 | 359 / 359 | 100% | 35.35 | 285 / 286 |
intestine | 100% | 3050.71 | 966 / 966 | 100% | 41.53 | 525 / 527 |
brain | 100% | 1309.03 | 2630 / 2642 | 100% | 26.55 | 705 / 705 |
bladder | 100% | 2223.95 | 21 / 21 | 99% | 25.73 | 499 / 504 |
prostate | 100% | 1943.04 | 245 / 245 | 99% | 16.00 | 497 / 502 |
uterus | 100% | 1899.83 | 170 / 170 | 99% | 22.90 | 454 / 459 |
pancreas | 100% | 1599.33 | 328 / 328 | 99% | 29.43 | 176 / 178 |
ovary | 100% | 1600.44 | 180 / 180 | 99% | 21.40 | 424 / 430 |
breast | 100% | 2387.96 | 459 / 459 | 98% | 21.45 | 1100 / 1118 |
skin | 100% | 1468.79 | 1809 / 1809 | 97% | 16.04 | 460 / 472 |
liver | 100% | 1118.12 | 226 / 226 | 97% | 15.01 | 392 / 406 |
adrenal gland | 100% | 2589.51 | 258 / 258 | 90% | 18.85 | 208 / 230 |
adipose | 100% | 2197.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 21.22 | 29 / 29 |
spleen | 100% | 3775.11 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.44 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 21.98 | 1 / 1 |
blood vessel | 100% | 1756.88 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 861.87 | 848 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 1081.90 | 787 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1512.72 | 907 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 12.91 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0031669 | Biological process | cellular response to nutrient levels |
GO_0006633 | Biological process | fatty acid biosynthetic process |
GO_0006468 | Biological process | protein phosphorylation |
GO_0035878 | Biological process | nail development |
GO_0120162 | Biological process | positive regulation of cold-induced thermogenesis |
GO_0031588 | Cellular component | nucleotide-activated protein kinase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005515 | Molecular function | protein binding |
GO_0004672 | Molecular function | protein kinase activity |
Gene name | PRKAB1 |
Protein name | 5'-AMP-activated protein kinase subunit beta-1 (AMPK subunit beta-1) (AMPKb) Protein kinase AMP-activated non-catalytic subunit beta 1 |
Synonyms | AMPK |
Description | FUNCTION: Non-catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Also acts as a regulator of cellular polarity by remodeling the actin cytoskeleton; probably by indirectly activating myosin. Beta non-catalytic subunit acts as a scaffold on which the AMPK complex assembles, via its C-terminus that bridges alpha (PRKAA1 or PRKAA2) and gamma subunits (PRKAG1, PRKAG2 or PRKAG3). |
Accessions | F5H610 ENST00000545223.1 F5H2X8 Q9Y478 ENST00000630317.1 ENST00000540121.5 ENST00000541640.5 ENST00000537400.1 ENST00000229328.10 F5H4Y8 |