PRCD report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	7 studies	63% ± 19%	Explore
retinal cone cell	6 studies	68% ± 25%	Explore
retinal bipolar neuron	3 studies	42% ± 11%	Explore
OFF-bipolar cell	3 studies	28% ± 7%	Explore
rod bipolar cell	3 studies	25% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	6 studies	42% ± 20%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	98%	716.47	2581 / 2642	67%	1.91	474 / 705
skin	85%	155.85	1539 / 1809	53%	1.79	248 / 472
adrenal gland	58%	117.76	149 / 258	70%	18.32	162 / 230
lung	99%	344.24	572 / 578	16%	0.31	190 / 1155
uterus	99%	515.45	169 / 170	13%	0.26	58 / 459
thymus	99%	359.18	649 / 653	10%	0.16	60 / 605
bladder	100%	527.43	21 / 21	9%	0.17	45 / 504
breast	100%	562.23	459 / 459	6%	0.09	62 / 1118
intestine	98%	318.42	949 / 966	4%	0.07	19 / 527
ovary	95%	360.56	171 / 180	7%	0.10	29 / 430
adipose	100%	560.51	1204 / 1204	0%	0	0 / 0
spleen	100%	628.25	241 / 241	0%	0	0 / 0
prostate	98%	414.62	241 / 245	1%	0.02	6 / 502
esophagus	92%	231.08	1326 / 1445	5%	0.08	10 / 183
heart	97%	386.91	836 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	88%	4.34	70 / 80
stomach	83%	158.76	298 / 359	3%	0.05	10 / 286
kidney	71%	107.43	63 / 89	15%	0.23	133 / 901
muscle	65%	88.33	523 / 803	0%	0	0 / 0
pancreas	43%	49.98	140 / 328	22%	0.39	39 / 178
blood vessel	61%	126.77	812 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	45%	1.38	13 / 29
liver	28%	33.83	63 / 226	4%	0.14	18 / 406
peripheral blood	29%	35.37	273 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	9%	0.14	4 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1