Insufficient scRNA-seq data for expression of PRAMEF6 at single-cell level.
Insufficient scRNA-seq data for expression of PRAMEF6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| bladder | 14% | 0.19 | 3 / 21 | 0% | 0.02 | 1 / 504 |
| uterus | 4% | 0.06 | 6 / 170 | 0% | 0 | 0 / 459 |
| peripheral blood | 3% | 0.07 | 31 / 929 | 0% | 0 | 0 / 0 |
| liver | 3% | 0.07 | 7 / 226 | 0% | 0 | 0 / 406 |
| pancreas | 2% | 0.05 | 8 / 328 | 0% | 0 | 0 / 178 |
| skin | 2% | 0.05 | 32 / 1809 | 1% | 0.02 | 3 / 472 |
| adrenal gland | 2% | 0.04 | 5 / 258 | 0% | 0.02 | 1 / 230 |
| ovary | 2% | 0.04 | 4 / 180 | 0% | 0 | 0 / 430 |
| muscle | 2% | 0.05 | 17 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 2% | 0.04 | 28 / 1335 | 0% | 0 | 0 / 0 |
| esophagus | 2% | 0.06 | 28 / 1445 | 0% | 0 | 0 / 183 |
| stomach | 1% | 0.03 | 5 / 359 | 0% | 0.00 | 1 / 286 |
| spleen | 2% | 0.09 | 4 / 241 | 0% | 0 | 0 / 0 |
| prostate | 2% | 0.04 | 4 / 245 | 0% | 0 | 0 / 502 |
| intestine | 2% | 0.04 | 15 / 966 | 0% | 0 | 0 / 527 |
| adipose | 1% | 0.02 | 18 / 1204 | 0% | 0 | 0 / 0 |
| breast | 1% | 0.03 | 6 / 459 | 0% | 0 | 0 / 1118 |
| heart | 1% | 0.03 | 9 / 861 | 0% | 0 | 0 / 0 |
| brain | 1% | 0.03 | 27 / 2642 | 0% | 0 | 0 / 705 |
| thymus | 1% | 0.02 | 6 / 653 | 0% | 0 | 0 / 605 |
| lung | 1% | 0.02 | 4 / 578 | 0% | 0 | 0 / 1155 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| kidney | 0% | 0 | 0 / 89 | 0% | 0 | 0 / 901 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0045596 | Biological process | negative regulation of cell differentiation |
| GO_0008284 | Biological process | positive regulation of cell population proliferation |
| GO_0016567 | Biological process | protein ubiquitination |
| GO_0043066 | Biological process | negative regulation of apoptotic process |
| GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
| GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
| GO_0031462 | Cellular component | Cul2-RING ubiquitin ligase complex |
| GO_0005737 | Cellular component | cytoplasm |
| GO_1990756 | Molecular function | ubiquitin-like ligase-substrate adaptor activity |
| Gene name | PRAMEF6 |
| Protein name | PRAME family member 6 |
| Synonyms | |
| Description | FUNCTION: Substrate-recognition component of a Cul2-RING (CRL2) E3 ubiquitin-protein ligase complex, which mediates ubiquitination of target proteins, leading to their degradation . The CRL2(PRAMEF6) complex mediates ubiquitination and degradation of truncated MSRB1/SEPX1 selenoproteins produced by failed UGA/Sec decoding . . |
| Accessions | ENST00000376189.5 ENST00000632388.1 ENST00000415464.6 ENST00000632295.1 Q5VXH4 |