Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 30 studies | 36% ± 17% | |
endothelial cell | 19 studies | 29% ± 11% | |
endothelial cell of lymphatic vessel | 14 studies | 32% ± 11% | |
smooth muscle cell | 12 studies | 29% ± 11% | |
connective tissue cell | 11 studies | 41% ± 19% | |
myofibroblast cell | 11 studies | 40% ± 18% | |
vein endothelial cell | 11 studies | 24% ± 7% | |
pericyte | 11 studies | 30% ± 13% | |
basal cell | 9 studies | 33% ± 16% | |
endothelial cell of vascular tree | 8 studies | 22% ± 4% | |
epithelial cell | 8 studies | 30% ± 14% | |
goblet cell | 7 studies | 24% ± 5% | |
ciliated cell | 7 studies | 37% ± 15% | |
club cell | 6 studies | 26% ± 11% | |
capillary endothelial cell | 6 studies | 25% ± 6% | |
endothelial cell of artery | 6 studies | 23% ± 4% | |
mesothelial cell | 5 studies | 30% ± 14% | |
secretory cell | 4 studies | 42% ± 20% | |
enterocyte | 4 studies | 23% ± 3% | |
adventitial cell | 4 studies | 34% ± 7% | |
alveolar macrophage | 4 studies | 21% ± 3% | |
abnormal cell | 3 studies | 24% ± 10% | |
serous secreting cell | 3 studies | 29% ± 5% | |
pancreatic ductal cell | 3 studies | 50% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 1205.69 | 170 / 170 | 99% | 76.67 | 456 / 459 |
breast | 100% | 1484.30 | 459 / 459 | 99% | 71.38 | 1108 / 1118 |
lung | 100% | 1359.21 | 577 / 578 | 99% | 55.79 | 1146 / 1155 |
thymus | 100% | 2238.74 | 653 / 653 | 99% | 71.37 | 598 / 605 |
kidney | 100% | 1103.29 | 89 / 89 | 99% | 45.44 | 890 / 901 |
liver | 100% | 690.92 | 226 / 226 | 98% | 39.48 | 398 / 406 |
intestine | 100% | 1720.14 | 965 / 966 | 98% | 52.94 | 517 / 527 |
pancreas | 99% | 810.20 | 326 / 328 | 98% | 78.49 | 175 / 178 |
bladder | 100% | 1800.95 | 21 / 21 | 97% | 62.94 | 491 / 504 |
esophagus | 100% | 1558.08 | 1445 / 1445 | 97% | 38.40 | 178 / 183 |
stomach | 99% | 836.21 | 357 / 359 | 95% | 42.24 | 271 / 286 |
ovary | 99% | 756.72 | 179 / 180 | 91% | 29.94 | 393 / 430 |
prostate | 100% | 1095.50 | 244 / 245 | 87% | 21.84 | 435 / 502 |
skin | 100% | 1107.85 | 1806 / 1809 | 68% | 19.47 | 321 / 472 |
adrenal gland | 99% | 954.72 | 256 / 258 | 42% | 11.44 | 97 / 230 |
adipose | 100% | 1516.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 49.96 | 45 / 45 |
heart | 100% | 1295.41 | 860 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2277.21 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 664.88 | 788 / 803 | 0% | 0 | 0 / 0 |
spleen | 88% | 368.56 | 212 / 241 | 0% | 0 | 0 / 0 |
brain | 12% | 38.84 | 329 / 2642 | 38% | 10.00 | 266 / 705 |
lymph node | 0% | 0 | 0 / 0 | 31% | 4.60 | 9 / 29 |
eye | 0% | 0 | 0 / 0 | 16% | 2.26 | 13 / 80 |
peripheral blood | 1% | 5.77 | 11 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006457 | Biological process | protein folding |
GO_0000413 | Biological process | protein peptidyl-prolyl isomerization |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0016018 | Molecular function | cyclosporin A binding |
GO_0005515 | Molecular function | protein binding |
GO_0003755 | Molecular function | peptidyl-prolyl cis-trans isomerase activity |
Gene name | PPIC |
Protein name | Peptidyl-prolyl cis-trans isomerase C (PPIase C) (EC 5.2.1.8) (Cyclophilin C) (Rotamase C) |
Synonyms | CYPC |
Description | FUNCTION: PPIase that catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides and may therefore assist protein folding. . |
Accessions | P45877 ENST00000306442.5 |