Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 28% ± 10% | |
adipocyte | 9 studies | 21% ± 6% | |
glutamatergic neuron | 7 studies | 33% ± 23% | |
microglial cell | 6 studies | 23% ± 6% | |
epithelial cell | 6 studies | 29% ± 9% | |
GABAergic neuron | 6 studies | 32% ± 19% | |
astrocyte | 6 studies | 26% ± 11% | |
myeloid cell | 5 studies | 20% ± 2% | |
oligodendrocyte | 5 studies | 21% ± 6% | |
fibroblast | 5 studies | 22% ± 8% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 9% | |
macrophage | 4 studies | 26% ± 9% | |
interneuron | 4 studies | 40% ± 23% | |
GABAergic interneuron | 3 studies | 18% ± 2% | |
retinal cone cell | 3 studies | 18% ± 2% | |
ciliated cell | 3 studies | 20% ± 2% | |
lymphocyte | 3 studies | 24% ± 6% | |
hepatocyte | 3 studies | 41% ± 27% | |
abnormal cell | 3 studies | 36% ± 10% | |
endothelial cell of lymphatic vessel | 3 studies | 24% ± 4% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
type I pneumocyte | 3 studies | 20% ± 5% | |
goblet cell | 3 studies | 30% ± 14% | |
transit amplifying cell | 3 studies | 28% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2581.18 | 1445 / 1445 | 100% | 27.12 | 183 / 183 |
intestine | 100% | 2936.55 | 966 / 966 | 99% | 14.90 | 524 / 527 |
stomach | 100% | 2539.29 | 359 / 359 | 99% | 18.91 | 284 / 286 |
skin | 100% | 3099.03 | 1809 / 1809 | 99% | 23.33 | 465 / 472 |
ovary | 100% | 3273.17 | 180 / 180 | 98% | 18.07 | 423 / 430 |
lung | 100% | 2549.36 | 578 / 578 | 98% | 15.22 | 1129 / 1155 |
pancreas | 100% | 2032.48 | 328 / 328 | 94% | 8.93 | 168 / 178 |
breast | 100% | 3159.12 | 459 / 459 | 94% | 12.52 | 1054 / 1118 |
brain | 97% | 1882.30 | 2550 / 2642 | 98% | 16.80 | 689 / 705 |
bladder | 100% | 2821.14 | 21 / 21 | 93% | 10.29 | 469 / 504 |
kidney | 100% | 2188.98 | 89 / 89 | 93% | 11.87 | 834 / 901 |
prostate | 100% | 2999.73 | 245 / 245 | 92% | 11.70 | 460 / 502 |
thymus | 100% | 3235.80 | 653 / 653 | 87% | 8.45 | 529 / 605 |
uterus | 100% | 3044.56 | 170 / 170 | 86% | 8.55 | 393 / 459 |
adrenal gland | 100% | 2765.81 | 258 / 258 | 78% | 7.43 | 179 / 230 |
liver | 100% | 1673.44 | 225 / 226 | 73% | 5.99 | 298 / 406 |
adipose | 100% | 3156.87 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2089.78 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3159.51 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2431.47 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 13.25 | 79 / 80 |
heart | 98% | 1470.43 | 842 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 10.99 | 41 / 45 |
peripheral blood | 90% | 1999.92 | 836 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 9.88 | 20 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006405 | Biological process | RNA export from nucleus |
GO_0006606 | Biological process | protein import into nucleus |
GO_0051028 | Biological process | mRNA transport |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005643 | Cellular component | nuclear pore |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0008139 | Molecular function | nuclear localization sequence binding |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | POM121 |
Protein name | Nuclear envelope pore membrane protein POM 121 (Nuclear envelope pore membrane protein POM 121A) (Nucleoporin Nup121) (Pore membrane protein of 121 kDa) |
Synonyms | POM121A KIAA0618 NUP121 |
Description | FUNCTION: Essential component of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane. When overexpressed in cells induces the formation of cytoplasmic annulate lamellae (AL). . |
Accessions | ENST00000627934.3 [Q96HA1-2] Q96HA1 ENST00000395270.5 [Q96HA1-3] ENST00000434423.5 [Q96HA1-1] |