Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1618.63 | 459 / 459 | 100% | 35.18 | 1118 / 1118 |
esophagus | 100% | 1079.99 | 1445 / 1445 | 100% | 23.31 | 183 / 183 |
intestine | 100% | 1187.51 | 966 / 966 | 100% | 23.09 | 527 / 527 |
ovary | 100% | 1423.37 | 180 / 180 | 100% | 30.29 | 430 / 430 |
skin | 100% | 1756.44 | 1809 / 1809 | 100% | 33.57 | 472 / 472 |
stomach | 100% | 934.53 | 359 / 359 | 100% | 23.42 | 286 / 286 |
uterus | 100% | 1412.98 | 170 / 170 | 100% | 26.48 | 459 / 459 |
thymus | 100% | 1161.30 | 653 / 653 | 100% | 21.59 | 604 / 605 |
bladder | 100% | 1318.19 | 21 / 21 | 100% | 22.57 | 503 / 504 |
prostate | 100% | 1084.28 | 245 / 245 | 100% | 15.63 | 501 / 502 |
lung | 100% | 1095.98 | 576 / 578 | 100% | 25.20 | 1155 / 1155 |
pancreas | 99% | 811.71 | 326 / 328 | 100% | 18.29 | 178 / 178 |
kidney | 100% | 899.67 | 89 / 89 | 98% | 19.24 | 880 / 901 |
brain | 96% | 702.69 | 2539 / 2642 | 100% | 21.12 | 705 / 705 |
liver | 97% | 457.57 | 220 / 226 | 98% | 15.21 | 399 / 406 |
adrenal gland | 100% | 861.14 | 258 / 258 | 94% | 12.75 | 217 / 230 |
adipose | 100% | 1578.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1333.44 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.02 | 29 / 29 |
spleen | 100% | 1281.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.77 | 1 / 1 |
muscle | 100% | 858.41 | 802 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 24.23 | 79 / 80 |
peripheral blood | 98% | 947.56 | 907 / 929 | 0% | 0 | 0 / 0 |
heart | 96% | 629.27 | 829 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051607 | Biological process | defense response to virus |
GO_0006351 | Biological process | DNA-templated transcription |
GO_0006359 | Biological process | regulation of transcription by RNA polymerase III |
GO_0032728 | Biological process | positive regulation of interferon-beta production |
GO_0045089 | Biological process | positive regulation of innate immune response |
GO_0045087 | Biological process | innate immune response |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005666 | Cellular component | RNA polymerase III complex |
GO_0005515 | Molecular function | protein binding |
GO_0003899 | Molecular function | DNA-directed 5'-3' RNA polymerase activity |
GO_0003697 | Molecular function | single-stranded DNA binding |
Gene name | POLR3C |
Protein name | DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) (DNA-directed RNA polymerase III subunit C) (RNA polymerase III 62 kDa subunit) (RPC62) |
Synonyms | |
Description | FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates . Specific peripheric component of RNA polymerase III (Pol III) which synthesizes small non-coding RNAs including 5S rRNA, snRNAs, tRNAs and miRNAs from at least 500 distinct genomic loci . Part of POLR3C/RPC3-POLR3F/RPC6-POLR3G/RPC7 heterotrimer, coordinates the dynamics of Pol III stalk and clamp modules during the transition from apo to elongation state . Pol III plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as a nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF-kappa-B through the RIG-I pathway . Preferentially binds single-stranded DNA (ssDNA) in a sequence-independent manner . . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. . |
Accessions | ENST00000334163.4 A0A8V8TM82 ENST00000698751.1 ENST00000466003.1 E9PHH9 ENST00000698762.1 ENST00000698760.1 ENST00000471254.5 ENST00000698756.1 Q9BUI4 Q9BT08 A0A8V8TMN9 ENST00000698761.1 ENST00000369294.5 A0A8V8TM54 A0A8V8TNN2 |