PODXL2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	9 studies	37% ± 20%	Explore
neuron	8 studies	41% ± 20%	Explore
glutamatergic neuron	6 studies	42% ± 22%	Explore
interneuron	6 studies	36% ± 20%	Explore
oligodendrocyte precursor cell	5 studies	25% ± 6%	Explore
amacrine cell	4 studies	37% ± 19%	Explore
retinal ganglion cell	4 studies	63% ± 24%	Explore
retinal bipolar neuron	3 studies	25% ± 6%	Explore
GABAergic interneuron	3 studies	25% ± 5%	Explore
retina horizontal cell	3 studies	27% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	8 studies	26% ± 12%	Explore
eye	3 studies	22% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	5804.91	2640 / 2642	99%	216.17	695 / 705
adrenal gland	99%	1534.69	255 / 258	83%	146.99	190 / 230
ovary	87%	994.56	156 / 180	85%	73.67	367 / 430
prostate	69%	938.93	168 / 245	100%	215.11	500 / 502
stomach	77%	981.95	275 / 359	83%	78.06	237 / 286
skin	58%	486.51	1052 / 1809	85%	100.53	403 / 472
breast	55%	547.95	251 / 459	86%	83.11	957 / 1118
intestine	37%	331.80	361 / 966	90%	84.56	472 / 527
pancreas	41%	296.79	135 / 328	67%	45.41	120 / 178
uterus	15%	128.75	25 / 170	86%	99.38	395 / 459
eye	0%	0	0 / 0	100%	187.54	80 / 80
ureter	0%	0	0 / 0	100%	112.46	1 / 1
thymus	59%	494.79	385 / 653	39%	17.34	238 / 605
bladder	14%	101.00	3 / 21	78%	81.58	392 / 504
kidney	64%	541.31	57 / 89	28%	18.59	249 / 901
tonsil	0%	0	0 / 0	82%	87.45	37 / 45
lung	3%	14.74	15 / 578	76%	72.74	873 / 1155
esophagus	11%	70.88	158 / 1445	67%	46.63	122 / 183
lymph node	0%	0	0 / 0	34%	12.62	10 / 29
blood vessel	20%	128.94	266 / 1335	0%	0	0 / 0
adipose	19%	122.57	231 / 1204	0%	0	0 / 0
liver	0%	2.94	1 / 226	18%	12.71	74 / 406
heart	7%	46.94	59 / 861	0%	0	0 / 0
muscle	2%	14.53	20 / 803	0%	0	0 / 0
peripheral blood	2%	16.55	21 / 929	0%	0	0 / 0
spleen	1%	5.83	2 / 241	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0