Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 20% ± 5% | |
epithelial cell | 6 studies | 31% ± 11% | |
astrocyte | 4 studies | 19% ± 2% | |
basal cell | 4 studies | 30% ± 10% | |
fibroblast | 3 studies | 22% ± 4% | |
ciliated cell | 3 studies | 28% ± 5% | |
GABAergic neuron | 3 studies | 29% ± 4% | |
glutamatergic neuron | 3 studies | 40% ± 5% | |
dendritic cell | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 26% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2623.93 | 2642 / 2642 | 100% | 52.50 | 705 / 705 |
breast | 100% | 2865.00 | 459 / 459 | 100% | 38.30 | 1118 / 1118 |
esophagus | 100% | 2893.19 | 1445 / 1445 | 100% | 30.12 | 183 / 183 |
liver | 100% | 1921.61 | 226 / 226 | 100% | 22.72 | 406 / 406 |
ovary | 100% | 2804.18 | 180 / 180 | 100% | 28.65 | 430 / 430 |
stomach | 100% | 2163.51 | 359 / 359 | 100% | 27.03 | 286 / 286 |
uterus | 100% | 3236.04 | 170 / 170 | 100% | 40.01 | 459 / 459 |
kidney | 100% | 2049.83 | 89 / 89 | 100% | 28.11 | 900 / 901 |
thymus | 100% | 3012.53 | 653 / 653 | 100% | 54.41 | 604 / 605 |
intestine | 100% | 2897.87 | 966 / 966 | 100% | 31.63 | 526 / 527 |
bladder | 100% | 2697.76 | 21 / 21 | 100% | 30.70 | 503 / 504 |
prostate | 100% | 2402.67 | 245 / 245 | 100% | 29.65 | 501 / 502 |
lung | 100% | 2133.17 | 576 / 578 | 100% | 34.25 | 1155 / 1155 |
skin | 100% | 3052.04 | 1809 / 1809 | 100% | 38.75 | 470 / 472 |
pancreas | 100% | 1351.82 | 327 / 328 | 99% | 26.73 | 177 / 178 |
adrenal gland | 100% | 2367.22 | 258 / 258 | 99% | 28.99 | 227 / 230 |
adipose | 100% | 2585.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2811.20 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.92 | 29 / 29 |
spleen | 100% | 2619.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 42.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.04 | 1 / 1 |
muscle | 100% | 1863.02 | 801 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 26.51 | 78 / 80 |
heart | 97% | 1567.00 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 80% | 1516.69 | 739 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1900087 | Biological process | positive regulation of G1/S transition of mitotic cell cycle |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0034504 | Biological process | protein localization to nucleus |
GO_0016607 | Cellular component | nuclear speck |
GO_0071013 | Cellular component | catalytic step 2 spliceosome |
GO_0005662 | Cellular component | DNA replication factor A complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0071007 | Cellular component | U2-type catalytic step 2 spliceosome |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0000974 | Cellular component | Prp19 complex |
GO_0001650 | Cellular component | fibrillar center |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | PLRG1 |
Protein name | Pleiotropic regulator 1 |
Synonyms | |
Description | FUNCTION: Involved in pre-mRNA splicing as component of the spliceosome . Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing . As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs (Probable). . |
Accessions | ENST00000509975.5 ENST00000506627.5 ENST00000499023.7 [O43660-1] H0YA24 ENST00000503251.5 ENST00000302078.9 [O43660-2] O43660 B7Z982 ENST00000506192.5 H0YAA2 D6RA26 ENST00000504341.1 D6RE04 |