Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 38% ± 12% | |
astrocyte | 10 studies | 33% ± 15% | |
ciliated cell | 8 studies | 30% ± 9% | |
retinal cone cell | 8 studies | 70% ± 22% | |
retinal rod cell | 8 studies | 57% ± 21% | |
retinal pigment epithelial cell | 4 studies | 51% ± 17% | |
Mueller cell | 4 studies | 48% ± 16% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 16% | |
brush cell | 4 studies | 46% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 56509.07 | 2640 / 2642 | 100% | 406.23 | 702 / 705 |
intestine | 34% | 2031.20 | 331 / 966 | 70% | 27.99 | 369 / 527 |
thymus | 24% | 1041.01 | 154 / 653 | 80% | 33.09 | 484 / 605 |
prostate | 3% | 130.94 | 8 / 245 | 88% | 31.03 | 443 / 502 |
ovary | 1% | 18.85 | 1 / 180 | 87% | 42.78 | 376 / 430 |
skin | 0% | 2.66 | 1 / 1809 | 76% | 82.78 | 360 / 472 |
stomach | 5% | 225.80 | 17 / 359 | 68% | 31.84 | 194 / 286 |
eye | 0% | 0 | 0 / 0 | 73% | 31.50 | 58 / 80 |
pancreas | 0% | 0 | 0 / 328 | 72% | 23.71 | 128 / 178 |
esophagus | 14% | 625.88 | 197 / 1445 | 35% | 18.77 | 64 / 183 |
breast | 0% | 21.49 | 2 / 459 | 46% | 19.50 | 510 / 1118 |
lung | 1% | 42.93 | 4 / 578 | 45% | 15.69 | 516 / 1155 |
bladder | 0% | 0 | 0 / 21 | 29% | 11.52 | 147 / 504 |
lymph node | 0% | 0 | 0 / 0 | 28% | 4.59 | 8 / 29 |
kidney | 0% | 0 | 0 / 89 | 27% | 7.46 | 244 / 901 |
uterus | 0% | 0 | 0 / 170 | 24% | 7.71 | 109 / 459 |
liver | 0% | 0 | 0 / 226 | 15% | 8.67 | 59 / 406 |
adrenal gland | 0% | 0 | 0 / 258 | 8% | 1.30 | 18 / 230 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.33 | 1 / 45 |
heart | 0% | 19.34 | 4 / 861 | 0% | 0 | 0 / 0 |
adipose | 0% | 8.97 | 3 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 5.99 | 2 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007602 | Biological process | phototransduction |
GO_0045595 | Biological process | regulation of cell differentiation |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | PLEKHB1 |
Protein name | Pleckstrin homology domain-containing family B member 1 (PH domain-containing family B member 1) (Evectin-1) (PH domain-containing protein in retina 1) (PHRET1) (Pleckstrin homology domain retinal protein 1) Pleckstrin homology domain containing B1 |
Synonyms | EVT1 PHRET1 KPL1 PHR1 |
Description | |
Accessions | F5H0R6 ENST00000540431.1 ENST00000539157.5 F5H866 F5H1B8 ENST00000542389.5 F5H114 ENST00000227214.10 [Q9UF11-4] F5H190 F5H3M1 ENST00000354190.10 [Q9UF11-1] F5GZ38 F5GY87 ENST00000545798.5 F5GZH3 ENST00000535582.5 ENST00000538227.5 ENST00000543085.5 ENST00000535129.5 [Q9UF11-4] ENST00000398492.8 [Q9UF11-2] ENST00000536527.5 F5GYU9 ENST00000541597.5 ENST00000546251.5 F5GY96 ENST00000543524.5 Q9UF11 ENST00000398494.8 [Q9UF11-3] |