Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 26% ± 4% | |
epithelial cell | 6 studies | 32% ± 18% | |
fibroblast | 6 studies | 21% ± 5% | |
pericyte | 6 studies | 18% ± 2% | |
smooth muscle cell | 5 studies | 20% ± 3% | |
B cell | 4 studies | 25% ± 12% | |
retina horizontal cell | 4 studies | 32% ± 11% | |
oligodendrocyte | 4 studies | 19% ± 3% | |
non-classical monocyte | 3 studies | 22% ± 8% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 18% ± 2% | |
retinal bipolar neuron | 3 studies | 27% ± 5% | |
retinal ganglion cell | 3 studies | 47% ± 24% | |
amacrine cell | 3 studies | 31% ± 10% | |
ciliated cell | 3 studies | 32% ± 7% | |
gamma-delta T cell | 3 studies | 19% ± 4% | |
GABAergic neuron | 3 studies | 37% ± 4% | |
glutamatergic neuron | 3 studies | 43% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1591.73 | 459 / 459 | 100% | 6.40 | 1118 / 1118 |
ovary | 100% | 1690.48 | 180 / 180 | 100% | 6.78 | 430 / 430 |
brain | 100% | 1620.23 | 2639 / 2642 | 100% | 5.80 | 705 / 705 |
esophagus | 100% | 1573.47 | 1443 / 1445 | 100% | 7.15 | 183 / 183 |
lung | 100% | 1492.73 | 577 / 578 | 100% | 6.00 | 1155 / 1155 |
prostate | 100% | 1626.22 | 245 / 245 | 100% | 5.64 | 501 / 502 |
thymus | 100% | 1684.72 | 653 / 653 | 100% | 7.89 | 603 / 605 |
uterus | 100% | 1727.21 | 170 / 170 | 100% | 4.60 | 457 / 459 |
bladder | 100% | 1733.05 | 21 / 21 | 99% | 4.62 | 501 / 504 |
intestine | 100% | 1688.00 | 966 / 966 | 99% | 4.98 | 523 / 527 |
adrenal gland | 100% | 1776.03 | 258 / 258 | 99% | 7.38 | 228 / 230 |
kidney | 100% | 1329.57 | 89 / 89 | 99% | 5.45 | 892 / 901 |
stomach | 100% | 1352.34 | 359 / 359 | 99% | 5.83 | 283 / 286 |
pancreas | 99% | 678.46 | 325 / 328 | 99% | 5.07 | 176 / 178 |
liver | 100% | 826.08 | 226 / 226 | 98% | 3.03 | 396 / 406 |
skin | 100% | 974.19 | 1804 / 1809 | 96% | 4.75 | 451 / 472 |
adipose | 100% | 1625.00 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2046.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 3.70 | 29 / 29 |
spleen | 100% | 1251.11 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 3.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.64 | 1 / 1 |
heart | 99% | 1381.38 | 852 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 631.08 | 792 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 84% | 2.51 | 67 / 80 |
peripheral blood | 74% | 519.62 | 690 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0008150 | Biological process | biological_process |
GO_0007032 | Biological process | endosome organization |
GO_0001881 | Biological process | receptor recycling |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0055037 | Cellular component | recycling endosome |
GO_0005769 | Cellular component | early endosome |
GO_0070273 | Molecular function | phosphatidylinositol-4-phosphate binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PLEKHA3 |
Protein name | Pleckstrin homology domain-containing family A member 3 (PH domain-containing family A member 3) (Phosphatidylinositol-four-phosphate adapter protein 1) (FAPP-1) (Phosphoinositol 4-phosphate adapter protein 1) Pleckstrin homology domain containing A3 |
Synonyms | FAPP1 |
Description | FUNCTION: Plays a role in regulation of vesicular cargo transport from the trans-Golgi network (TGN) to the plasma membrane . Regulates Golgi phosphatidylinositol 4-phosphate (PtdIns(4)P) levels and activates the PtdIns(4)P phosphatase activity of SACM1L when it binds PtdIns(4)P in 'trans' configuration . Binds preferentially to PtdIns(4)P . Negatively regulates APOB secretion from hepatocytes . . |
Accessions | H7C0Q0 Q9HB20 ENST00000234453.10 F8WCR7 ENST00000453653.5 ENST00000421187.1 |