Name | Number of supported studies | Average coverage | |
---|---|---|---|
microglial cell | 6 studies | 25% ± 7% | |
cardiac muscle cell | 4 studies | 19% ± 2% | |
endothelial cell | 3 studies | 23% ± 3% | |
glutamatergic neuron | 3 studies | 28% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 509.60 | 647 / 653 | 89% | 10.00 | 538 / 605 |
ovary | 99% | 842.28 | 179 / 180 | 87% | 5.87 | 374 / 430 |
lung | 99% | 658.05 | 574 / 578 | 74% | 3.66 | 853 / 1155 |
esophagus | 89% | 220.53 | 1288 / 1445 | 79% | 5.17 | 144 / 183 |
skin | 98% | 627.45 | 1775 / 1809 | 66% | 3.71 | 311 / 472 |
bladder | 81% | 429.52 | 17 / 21 | 63% | 2.59 | 320 / 504 |
stomach | 93% | 312.98 | 333 / 359 | 50% | 1.81 | 144 / 286 |
intestine | 97% | 388.70 | 935 / 966 | 45% | 1.48 | 236 / 527 |
adrenal gland | 66% | 134.46 | 169 / 258 | 71% | 4.67 | 163 / 230 |
uterus | 83% | 507.09 | 141 / 170 | 49% | 2.93 | 227 / 459 |
pancreas | 73% | 136.51 | 239 / 328 | 58% | 2.19 | 104 / 178 |
kidney | 100% | 439.66 | 89 / 89 | 30% | 1.51 | 266 / 901 |
prostate | 98% | 500.54 | 239 / 245 | 28% | 0.47 | 142 / 502 |
brain | 84% | 277.58 | 2209 / 2642 | 31% | 0.69 | 219 / 705 |
breast | 90% | 352.63 | 415 / 459 | 19% | 0.57 | 213 / 1118 |
spleen | 100% | 886.61 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 95% | 579.16 | 817 / 861 | 0% | 0 | 0 / 0 |
adipose | 87% | 249.51 | 1049 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 78% | 4.17 | 62 / 80 |
lymph node | 0% | 0 | 0 / 0 | 72% | 2.05 | 21 / 29 |
liver | 18% | 27.51 | 41 / 226 | 32% | 0.79 | 130 / 406 |
tonsil | 0% | 0 | 0 / 0 | 47% | 1.57 | 21 / 45 |
blood vessel | 44% | 79.21 | 582 / 1335 | 0% | 0 | 0 / 0 |
muscle | 31% | 53.74 | 248 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 29% | 178.43 | 265 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0035264 | Biological process | multicellular organism growth |
GO_0060252 | Biological process | positive regulation of glial cell proliferation |
GO_0060736 | Biological process | prostate gland growth |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0022612 | Biological process | gland morphogenesis |
GO_0016607 | Cellular component | nuclear speck |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | PLAG1 |
Protein name | CHCHD7-PLAG1 fusion protein Zinc finger protein PLAG1 (Pleiomorphic adenoma gene 1 protein) |
Synonyms | |
Description | FUNCTION: Transcription factor whose activation results in up-regulation of target genes, such as IGFII, leading to uncontrolled cell proliferation: when overexpressed in cultured cells, higher proliferation rate and transformation are observed. Other target genes such as CRLF1, CRABP2, CRIP2, PIGF are strongly induced in cells with PLAG1 induction. Proto-oncogene whose ectopic expression can trigger the development of pleomorphic adenomas of the salivary gland and lipoblastomas. Overexpression is associated with up-regulation of IGFII, is frequently observed in hepatoblastoma, common primary liver tumor in childhood. Cooperates with CBFB-MYH11, a fusion gene important for myeloid leukemia. . |
Accessions | A7IT79 ENST00000423799.6 [Q6DJT9-2] ENST00000429357.2 [Q6DJT9-1] A7IT80 Q6DJT9 ENST00000316981.8 [Q6DJT9-1] |