Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal rod cell | 5 studies | 30% ± 12% | |
retinal cone cell | 3 studies | 38% ± 27% |
Insufficient scRNA-seq data for expression of PIWIL1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 88% | 43.61 | 576 / 653 | 59% | 8.75 | 359 / 605 |
spleen | 94% | 100.63 | 227 / 241 | 0% | 0 | 0 / 0 |
kidney | 93% | 39.03 | 83 / 89 | 1% | 0.01 | 5 / 901 |
intestine | 19% | 5.26 | 185 / 966 | 47% | 4.86 | 246 / 527 |
ovary | 40% | 9.74 | 72 / 180 | 25% | 0.68 | 107 / 430 |
adrenal gland | 63% | 11.55 | 162 / 258 | 0% | 0.01 | 1 / 230 |
stomach | 10% | 1.04 | 35 / 359 | 41% | 2.99 | 116 / 286 |
skin | 43% | 8.04 | 779 / 1809 | 3% | 0.08 | 16 / 472 |
prostate | 42% | 12.64 | 102 / 245 | 1% | 0.04 | 6 / 502 |
esophagus | 11% | 2.03 | 163 / 1445 | 28% | 2.08 | 51 / 183 |
pancreas | 11% | 1.10 | 35 / 328 | 24% | 0.78 | 42 / 178 |
uterus | 21% | 6.86 | 36 / 170 | 11% | 0.71 | 51 / 459 |
bladder | 14% | 1.29 | 3 / 21 | 16% | 1.17 | 81 / 504 |
liver | 29% | 6.70 | 65 / 226 | 0% | 0.02 | 2 / 406 |
brain | 21% | 3.19 | 559 / 2642 | 0% | 0.01 | 3 / 705 |
heart | 20% | 2.93 | 172 / 861 | 0% | 0 | 0 / 0 |
breast | 19% | 6.34 | 88 / 459 | 0% | 0.01 | 3 / 1118 |
lung | 8% | 1.16 | 47 / 578 | 10% | 0.65 | 119 / 1155 |
adipose | 12% | 1.57 | 141 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.28 | 5 / 45 |
blood vessel | 8% | 0.97 | 107 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 5% | 0.13 | 4 / 80 |
peripheral blood | 3% | 0.25 | 26 / 929 | 0% | 0 | 0 / 0 |
muscle | 2% | 1.34 | 17 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007283 | Biological process | spermatogenesis |
GO_0141006 | Biological process | piRNA-mediated retrotransposon silencing by heterochromatin formation |
GO_0140990 | Biological process | primary piRNA processing |
GO_0006417 | Biological process | regulation of translation |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0031047 | Biological process | regulatory ncRNA-mediated gene silencing |
GO_0035092 | Biological process | sperm DNA condensation |
GO_0007286 | Biological process | spermatid development |
GO_0034587 | Biological process | piRNA processing |
GO_0043186 | Cellular component | P granule |
GO_0033391 | Cellular component | chromatoid body |
GO_0097433 | Cellular component | dense body |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0140262 | Molecular function | mRNA cap binding complex binding |
GO_0004521 | Molecular function | RNA endonuclease activity |
GO_0003727 | Molecular function | single-stranded RNA binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0003729 | Molecular function | mRNA binding |
GO_0034584 | Molecular function | piRNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PIWIL1 |
Protein name | Piwi-like protein 1 (EC 3.1.26.-) Piwi like RNA-mediated gene silencing 1 (Piwi-like protein 1) |
Synonyms | HIWI |
Description | FUNCTION: Endoribonuclease that plays a central role in postnatal germ cells by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and governs the methylation and subsequent repression of transposons. Directly binds methylated piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequence elements. Strongly prefers a uridine in the first position of their guide (g1U preference, also named 1U-bias). Not involved in the piRNA amplification loop, also named ping-pong amplification cycle. Acts as an endoribonuclease that cleaves transposon messenger RNAs. Besides their function in transposable elements repression, piRNAs are probably involved in other processes during meiosis such as translation regulation. Probable component of some RISC complex, which mediates RNA cleavage and translational silencing. Also plays a role in the formation of chromatoid bodies and is required for some miRNAs stability. Required to sequester RNF8 in the cytoplasm until late spermatogenesis; RNF8 being released upon ubiquitination and degradation of PIWIL1. .; FUNCTION: [Isoform 3]: May be a negative developmental regulator . . |
Accessions | ENST00000633252.1 ENST00000613226.2 [Q96J94-1] ENST00000634115.1 ENST00000539400.5 F5GYG0 ENST00000245255.7 [Q96J94-1] ENST00000535956.5 F5H3U6 ENST00000539995.5 F5H2F7 Q96J94 ENST00000632888.1 [Q96J94-2] ENST00000542723.1 ENST00000633272.1 ENST00000633042.1 ENST00000634077.1 F5GZL9 ENST00000546060.5 F5H889 |