Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| basal cell | 4 studies | 24% ± 8% | |
| classical monocyte | 3 studies | 22% ± 1% | |
| non-classical monocyte | 3 studies | 29% ± 8% | |
| epithelial cell | 3 studies | 41% ± 11% | |
| ciliated cell | 3 studies | 28% ± 11% |
Insufficient scRNA-seq data for expression of PEDS1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| bladder | 100% | 3462.00 | 21 / 21 | 100% | 28.71 | 504 / 504 |
| esophagus | 100% | 3857.08 | 1445 / 1445 | 100% | 28.25 | 183 / 183 |
| skin | 100% | 4500.13 | 1809 / 1809 | 100% | 24.13 | 472 / 472 |
| uterus | 100% | 2525.21 | 170 / 170 | 100% | 34.27 | 459 / 459 |
| brain | 100% | 2303.17 | 2639 / 2642 | 100% | 14.81 | 705 / 705 |
| lung | 100% | 3484.02 | 578 / 578 | 100% | 26.35 | 1153 / 1155 |
| intestine | 100% | 3055.00 | 966 / 966 | 100% | 18.80 | 526 / 527 |
| prostate | 100% | 2610.36 | 245 / 245 | 100% | 11.28 | 501 / 502 |
| thymus | 100% | 2002.35 | 652 / 653 | 100% | 12.61 | 604 / 605 |
| breast | 100% | 2574.77 | 459 / 459 | 99% | 16.85 | 1111 / 1118 |
| stomach | 100% | 2258.17 | 359 / 359 | 99% | 17.61 | 284 / 286 |
| ovary | 99% | 1298.02 | 179 / 180 | 100% | 12.14 | 428 / 430 |
| adrenal gland | 100% | 2468.34 | 258 / 258 | 98% | 13.05 | 226 / 230 |
| kidney | 99% | 1474.92 | 88 / 89 | 98% | 10.40 | 879 / 901 |
| liver | 100% | 1648.14 | 225 / 226 | 97% | 12.19 | 393 / 406 |
| pancreas | 97% | 974.89 | 318 / 328 | 99% | 19.69 | 176 / 178 |
| adipose | 100% | 3002.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 13.29 | 29 / 29 |
| spleen | 100% | 2105.27 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 38.59 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 24.78 | 1 / 1 |
| blood vessel | 100% | 2210.69 | 1331 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 2291.81 | 800 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 1905.83 | 853 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 13.85 | 79 / 80 |
| peripheral blood | 84% | 1029.30 | 780 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0008611 | Biological process | ether lipid biosynthetic process |
| GO_0006631 | Biological process | fatty acid metabolic process |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0050207 | Molecular function | plasmanylethanolamine desaturase activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PEDS1 |
| Protein name | Plasmanylethanolamine desaturase 1 HCG2044780, isoform CRA_b (Plasmanylethanolamine desaturase 1) (cDNA FLJ56328, highly similar to Homo sapiens ubiquitin-conjugating enzyme variant Kua (Kua), mRNA) Plasmanylethanolamine desaturase 1 (EC 1.14.19.77) (Transmembrane protein 189) |
| Synonyms | TMEM189 KUA hCG_2044780 PDES |
| Description | FUNCTION: Plasmanylethanolamine desaturase involved in plasmalogen biogenesis in the endoplasmic reticulum membrane . Plasmalogens are glycerophospholipids with a hydrocarbon chain linked by a vinyl ether bond at the glycerol sn-1 position, and are involved in antioxidative and signaling mechanisms . . |
| Accessions | F8WBY2 ENST00000371650.9 [A5PLL7-2] F8W924 Q5TGE2 ENST00000371658.3 ENST00000371652.9 [A5PLL7-1] A5PLL7 ENST00000453505.6 ENST00000371656.3 |
