Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell of proximal tubule | 9 studies | 54% ± 12% | |
enterocyte | 4 studies | 25% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 6 studies | 23% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 2544.22 | 226 / 226 | 97% | 81.38 | 393 / 406 |
kidney | 100% | 10988.74 | 89 / 89 | 89% | 139.57 | 805 / 901 |
adrenal gland | 98% | 109.20 | 254 / 258 | 28% | 7.16 | 65 / 230 |
pancreas | 100% | 458.41 | 328 / 328 | 26% | 4.68 | 47 / 178 |
breast | 87% | 618.67 | 401 / 459 | 39% | 31.29 | 434 / 1118 |
spleen | 93% | 35.61 | 225 / 241 | 0% | 0 | 0 / 0 |
stomach | 88% | 34.66 | 315 / 359 | 5% | 1.05 | 15 / 286 |
skin | 92% | 89.31 | 1670 / 1809 | 0% | 0.10 | 2 / 472 |
uterus | 89% | 33.26 | 151 / 170 | 4% | 1.19 | 17 / 459 |
brain | 92% | 250.96 | 2428 / 2642 | 0% | 0.04 | 2 / 705 |
intestine | 84% | 516.49 | 813 / 966 | 5% | 0.61 | 24 / 527 |
blood vessel | 87% | 32.46 | 1166 / 1335 | 0% | 0 | 0 / 0 |
prostate | 83% | 24.57 | 203 / 245 | 0% | 0 | 0 / 502 |
lung | 78% | 22.71 | 448 / 578 | 3% | 0.56 | 31 / 1155 |
esophagus | 63% | 18.92 | 910 / 1445 | 7% | 2.28 | 13 / 183 |
thymus | 70% | 18.49 | 456 / 653 | 0% | 0.02 | 1 / 605 |
adipose | 67% | 18.88 | 805 / 1204 | 0% | 0 | 0 / 0 |
ovary | 64% | 18.38 | 116 / 180 | 2% | 0.32 | 10 / 430 |
bladder | 62% | 16.14 | 13 / 21 | 3% | 0.81 | 17 / 504 |
heart | 36% | 8.66 | 306 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 31% | 13.34 | 290 / 929 | 0% | 0 | 0 / 0 |
muscle | 15% | 3.32 | 120 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0044070 | Biological process | regulation of monoatomic anion transport |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_1990961 | Biological process | xenobiotic detoxification by transmembrane export across the plasma membrane |
GO_1905477 | Biological process | positive regulation of protein localization to membrane |
GO_0090314 | Biological process | positive regulation of protein targeting to membrane |
GO_0032414 | Biological process | positive regulation of ion transmembrane transporter activity |
GO_1904064 | Biological process | positive regulation of cation transmembrane transport |
GO_0015879 | Biological process | carnitine transport |
GO_0031526 | Cellular component | brush border membrane |
GO_0005903 | Cellular component | brush border |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031528 | Cellular component | microvillus membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0043495 | Molecular function | protein-membrane adaptor activity |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0030165 | Molecular function | PDZ domain binding |
GO_0005124 | Molecular function | scavenger receptor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PDZK1 |
Protein name | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 (NHERF-3) (CFTR-associated protein of 70 kDa) (Na(+)/H(+) exchanger regulatory factor 3) (Na/Pi cotransporter C-terminal-associated protein 1) (NaPi-Cap1) (PDZ domain-containing protein 1) (Sodium-hydrogen exchanger regulatory factor 3) PDZ domain containing 1 |
Synonyms | NHERF3 CAP70 PDZD1 |
Description | FUNCTION: A scaffold protein that connects plasma membrane proteins and regulatory components, regulating their surface expression in epithelial cells apical domains. May be involved in the coordination of a diverse range of regulatory processes for ion transport and second messenger cascades. In complex with NHERF1, may cluster proteins that are functionally dependent in a mutual fashion and modulate the trafficking and the activity of the associated membrane proteins. May play a role in the cellular mechanisms associated with multidrug resistance through its interaction with ABCC2 and PDZK1IP1. May potentiate the CFTR chloride channel activity. Required for normal cell-surface expression of SCARB1. Plays a role in maintaining normal plasma cholesterol levels via its effects on SCARB1. Plays a role in the normal localization and function of the chloride-anion exchanger SLC26A6 to the plasma membrane in the brush border of the proximal tubule of the kidney. May be involved in the regulation of proximal tubular Na(+)-dependent inorganic phosphate cotransport therefore playing an important role in tubule function (By similarity). . |
Accessions | ENST00000417171.6 [Q5T2W1-1] ENST00000344770.6 [Q5T2W1-1] ENST00000443667.1 A0A0C4DG67 Q5T2W1 ENST00000451928.6 [Q5T2W1-2] |