PCDHA2 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of PCDHA2 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	95%	53.97	2506 / 2642	39%	1.28	278 / 705
ovary	99%	50.93	178 / 180	5%	0.08	23 / 430
kidney	94%	25.56	84 / 89	9%	0.18	85 / 901
uterus	98%	51.64	166 / 170	3%	0.06	16 / 459
lung	91%	25.50	526 / 578	2%	0.03	26 / 1155
pancreas	91%	22.77	299 / 328	2%	0.02	3 / 178
breast	86%	30.75	396 / 459	6%	0.11	72 / 1118
intestine	85%	17.07	823 / 966	1%	0.01	3 / 527
thymus	84%	14.59	549 / 653	1%	0.01	5 / 605
prostate	76%	12.78	185 / 245	7%	0.12	36 / 502
adipose	65%	10.75	778 / 1204	0%	0	0 / 0
bladder	62%	6.19	13 / 21	1%	0.01	4 / 504
blood vessel	59%	7.73	788 / 1335	0%	0	0 / 0
stomach	55%	7.22	197 / 359	1%	0.02	4 / 286
spleen	55%	8.58	133 / 241	0%	0	0 / 0
esophagus	51%	6.50	737 / 1445	2%	0.03	4 / 183
adrenal gland	43%	6.04	111 / 258	10%	0.29	22 / 230
heart	37%	4.47	319 / 861	0%	0	0 / 0
skin	28%	2.73	513 / 1809	4%	0.08	21 / 472
liver	6%	0.41	13 / 226	1%	0.02	5 / 406
muscle	7%	0.54	53 / 803	0%	0	0 / 0
peripheral blood	6%	0.73	58 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.02	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007399	Biological process	nervous system development
GO_0007156	Biological process	homophilic cell adhesion via plasma membrane adhesion molecules
GO_0007155	Biological process	cell adhesion
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005886	Cellular component	plasma membrane
GO_0005634	Cellular component	nucleus
GO_0005509	Molecular function	calcium ion binding
GO_0005515	Molecular function	protein binding

Gene name	PCDHA2
Protein name	Protocadherin alpha-2 (PCDH-alpha-2)
Synonyms
Description	FUNCTION: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Accessions	Q9Y5H9 ENST00000520672.2 [Q9Y5H9-3] ENST00000708290.1 [Q9Y5H9-3] ENST00000708289.1 [Q9Y5H9-1] ENST00000708288.1 [Q9Y5H9-2] ENST00000378132.2 [Q9Y5H9-2] ENST00000526136.2 [Q9Y5H9-1]

PCDHA2 report