Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 6 studies | 24% ± 6% | |
| astrocyte | 5 studies | 30% ± 11% | |
| macrophage | 5 studies | 20% ± 2% | |
| retinal rod cell | 3 studies | 19% ± 3% | |
| basal cell | 3 studies | 23% ± 2% | |
| GABAergic neuron | 3 studies | 33% ± 7% | |
| glutamatergic neuron | 3 studies | 34% ± 4% | |
| dendritic cell | 3 studies | 17% ± 1% | |
| ciliated cell | 3 studies | 21% ± 6% | |
| adipocyte | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 516.51 | 245 / 245 | 100% | 6.18 | 501 / 502 |
| brain | 100% | 333.35 | 2630 / 2642 | 100% | 7.65 | 704 / 705 |
| intestine | 100% | 552.23 | 966 / 966 | 99% | 6.10 | 523 / 527 |
| kidney | 100% | 668.36 | 89 / 89 | 99% | 8.66 | 894 / 901 |
| thymus | 100% | 785.10 | 653 / 653 | 99% | 7.99 | 600 / 605 |
| esophagus | 100% | 562.57 | 1445 / 1445 | 99% | 5.14 | 181 / 183 |
| breast | 100% | 462.29 | 459 / 459 | 99% | 9.12 | 1105 / 1118 |
| adrenal gland | 100% | 674.69 | 258 / 258 | 99% | 6.33 | 227 / 230 |
| stomach | 100% | 547.91 | 359 / 359 | 99% | 5.57 | 282 / 286 |
| uterus | 100% | 463.39 | 170 / 170 | 98% | 6.23 | 452 / 459 |
| liver | 100% | 502.42 | 226 / 226 | 98% | 5.86 | 398 / 406 |
| lung | 98% | 409.34 | 568 / 578 | 99% | 5.42 | 1147 / 1155 |
| pancreas | 100% | 511.02 | 328 / 328 | 97% | 6.34 | 173 / 178 |
| ovary | 100% | 509.82 | 180 / 180 | 97% | 5.07 | 416 / 430 |
| bladder | 100% | 513.67 | 21 / 21 | 97% | 4.99 | 487 / 504 |
| skin | 100% | 478.69 | 1809 / 1809 | 85% | 3.19 | 399 / 472 |
| adipose | 100% | 415.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 5.03 | 29 / 29 |
| muscle | 100% | 1382.11 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 540.34 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.13 | 1 / 1 |
| blood vessel | 100% | 365.33 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| heart | 98% | 542.59 | 847 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 6.99 | 43 / 45 |
| eye | 0% | 0 | 0 / 0 | 81% | 4.02 | 65 / 80 |
| peripheral blood | 65% | 171.66 | 600 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0019293 | Biological process | tyrosine biosynthetic process, by oxidation of phenylalanine |
| GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
| GO_0006729 | Biological process | tetrahydrobiopterin biosynthetic process |
| GO_0005575 | Cellular component | cellular_component |
| GO_0005634 | Cellular component | nucleus |
| GO_0008124 | Molecular function | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity |
| GO_0004505 | Molecular function | phenylalanine 4-monooxygenase activity |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PCBD2 |
| Protein name | Pterin-4-alpha-carbinolamine dehydratase 2 (PHS 2) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase 2) (DcoH-like protein DCoHm) (Dimerization cofactor of hepatocyte nuclear factor 1 from muscle) (HNF-1-alpha dimerization cofactor) 4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96) |
| Synonyms | DCOH2 DCOHM |
| Description | FUNCTION: Involved in tetrahydrobiopterin biosynthesis. Seems to both prevent the formation of 7-pterins and accelerate the formation of quinonoid-BH2 (By similarity). .; FUNCTION: Regulates the dimerization of homeodomain protein HNF-1-alpha and enhances its transcriptional activity. . |
| Accessions | Q9H0N5 H0YA52 ENST00000512783.5 ENST00000254908.11 ENST00000504352.1 |