Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 24% ± 6% | |
astrocyte | 5 studies | 30% ± 11% | |
macrophage | 5 studies | 20% ± 2% | |
retinal rod cell | 3 studies | 19% ± 3% | |
basal cell | 3 studies | 23% ± 2% | |
GABAergic neuron | 3 studies | 33% ± 7% | |
glutamatergic neuron | 3 studies | 34% ± 4% | |
dendritic cell | 3 studies | 17% ± 1% | |
ciliated cell | 3 studies | 21% ± 6% | |
adipocyte | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 516.51 | 245 / 245 | 100% | 6.18 | 501 / 502 |
brain | 100% | 333.35 | 2630 / 2642 | 100% | 7.65 | 704 / 705 |
intestine | 100% | 552.23 | 966 / 966 | 99% | 6.10 | 523 / 527 |
kidney | 100% | 668.36 | 89 / 89 | 99% | 8.66 | 894 / 901 |
thymus | 100% | 785.10 | 653 / 653 | 99% | 7.99 | 600 / 605 |
esophagus | 100% | 562.57 | 1445 / 1445 | 99% | 5.14 | 181 / 183 |
breast | 100% | 462.29 | 459 / 459 | 99% | 9.12 | 1105 / 1118 |
adrenal gland | 100% | 674.69 | 258 / 258 | 99% | 6.33 | 227 / 230 |
stomach | 100% | 547.91 | 359 / 359 | 99% | 5.57 | 282 / 286 |
uterus | 100% | 463.39 | 170 / 170 | 98% | 6.23 | 452 / 459 |
liver | 100% | 502.42 | 226 / 226 | 98% | 5.86 | 398 / 406 |
lung | 98% | 409.34 | 568 / 578 | 99% | 5.42 | 1147 / 1155 |
pancreas | 100% | 511.02 | 328 / 328 | 97% | 6.34 | 173 / 178 |
ovary | 100% | 509.82 | 180 / 180 | 97% | 5.07 | 416 / 430 |
bladder | 100% | 513.67 | 21 / 21 | 97% | 4.99 | 487 / 504 |
skin | 100% | 478.69 | 1809 / 1809 | 85% | 3.19 | 399 / 472 |
adipose | 100% | 415.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.03 | 29 / 29 |
muscle | 100% | 1382.11 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 540.34 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.13 | 1 / 1 |
blood vessel | 100% | 365.33 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 542.59 | 847 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 6.99 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 81% | 4.02 | 65 / 80 |
peripheral blood | 65% | 171.66 | 600 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0019293 | Biological process | tyrosine biosynthetic process, by oxidation of phenylalanine |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006729 | Biological process | tetrahydrobiopterin biosynthetic process |
GO_0005575 | Cellular component | cellular_component |
GO_0005634 | Cellular component | nucleus |
GO_0008124 | Molecular function | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity |
GO_0004505 | Molecular function | phenylalanine 4-monooxygenase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PCBD2 |
Protein name | Pterin-4-alpha-carbinolamine dehydratase 2 (PHS 2) (EC 4.2.1.96) (4-alpha-hydroxy-tetrahydropterin dehydratase 2) (DcoH-like protein DCoHm) (Dimerization cofactor of hepatocyte nuclear factor 1 from muscle) (HNF-1-alpha dimerization cofactor) 4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96) |
Synonyms | DCOH2 DCOHM |
Description | FUNCTION: Involved in tetrahydrobiopterin biosynthesis. Seems to both prevent the formation of 7-pterins and accelerate the formation of quinonoid-BH2 (By similarity). .; FUNCTION: Regulates the dimerization of homeodomain protein HNF-1-alpha and enhances its transcriptional activity. . |
Accessions | Q9H0N5 H0YA52 ENST00000512783.5 ENST00000254908.11 ENST00000504352.1 |