Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 15 studies | 89% ± 14% | |
glutamatergic neuron | 12 studies | 83% ± 17% | |
GABAergic neuron | 11 studies | 68% ± 25% | |
microglial cell | 9 studies | 33% ± 20% | |
endothelial cell | 7 studies | 43% ± 21% | |
oligodendrocyte | 7 studies | 37% ± 26% | |
retinal ganglion cell | 6 studies | 68% ± 29% | |
astrocyte | 5 studies | 44% ± 26% | |
neuron | 4 studies | 41% ± 23% | |
OFF-bipolar cell | 4 studies | 58% ± 27% | |
interneuron | 4 studies | 85% ± 19% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 75% ± 3% | |
GABAergic interneuron | 3 studies | 80% ± 15% | |
retinal pigment epithelial cell | 3 studies | 63% ± 25% | |
GABAergic amacrine cell | 3 studies | 42% ± 7% | |
ON-bipolar cell | 3 studies | 54% ± 28% | |
glycinergic amacrine cell | 3 studies | 53% ± 19% | |
rod bipolar cell | 3 studies | 61% ± 28% | |
amacrine cell | 3 studies | 60% ± 18% | |
granule cell | 3 studies | 79% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 5244.13 | 2604 / 2642 | 97% | 25.81 | 682 / 705 |
kidney | 1% | 4.69 | 1 / 89 | 30% | 2.53 | 271 / 901 |
adrenal gland | 1% | 6.96 | 2 / 258 | 27% | 2.44 | 61 / 230 |
thymus | 2% | 7.09 | 11 / 653 | 25% | 2.68 | 149 / 605 |
spleen | 23% | 89.34 | 55 / 241 | 0% | 0 | 0 / 0 |
breast | 4% | 18.11 | 20 / 459 | 10% | 0.26 | 111 / 1118 |
uterus | 11% | 44.58 | 19 / 170 | 2% | 0.18 | 9 / 459 |
pancreas | 0% | 0 | 0 / 328 | 12% | 0.27 | 22 / 178 |
esophagus | 8% | 31.95 | 122 / 1445 | 1% | 0.09 | 2 / 183 |
skin | 0% | 0.61 | 3 / 1809 | 8% | 0.36 | 36 / 472 |
stomach | 2% | 7.69 | 7 / 359 | 3% | 0.14 | 8 / 286 |
ovary | 2% | 8.02 | 3 / 180 | 3% | 0.09 | 11 / 430 |
adipose | 4% | 15.09 | 48 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 4% | 31.09 | 52 / 1335 | 0% | 0 | 0 / 0 |
intestine | 1% | 3.92 | 11 / 966 | 3% | 0.05 | 14 / 527 |
eye | 0% | 0 | 0 / 0 | 4% | 0.24 | 3 / 80 |
lung | 0% | 0 | 0 / 578 | 3% | 0.09 | 34 / 1155 |
heart | 1% | 4.22 | 11 / 861 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 1% | 0.02 | 6 / 504 |
prostate | 0% | 1.00 | 1 / 245 | 0% | 0.03 | 2 / 502 |
liver | 0% | 0 | 0 / 226 | 0% | 0.06 | 2 / 406 |
muscle | 0% | 0.41 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008038 | Biological process | neuron recognition |
GO_0007155 | Biological process | cell adhesion |
GO_0098552 | Cellular component | side of membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | OPCML |
Protein name | Opioid-binding protein/cell adhesion molecule (OBCAM) (OPCML) (Opioid-binding cell adhesion molecule) (IgLON family member 1) OPCML protein Opioid binding protein/cell adhesion molecule-like Opioid binding protein/cell adhesion molecule-like preprotein isoform a (Opioid binding protein/cell adhesion molecule-like, isoform CRA_a) (cDNA FLJ76211, highly similar to Homo sapiens opioid binding protein/cell adhesion molecule-like(OPCML), mRNA) Opioid binding protein/cell adhesion molecule-like isoform d (cDNA, FLJ79172, highly similar to Opioid-binding protein/cell adhesion moleculeprecursor) |
Synonyms | IGLON1 OBCAM hCG_1811667 |
Description | FUNCTION: Binds opioids in the presence of acidic lipids; probably involved in cell contact. |
Accessions | B2CZX3 Q14982 ENST00000524381.6 [Q14982-2] ENST00000374778.4 [Q14982-3] A8K0Y0 B7ZLQ0 ENST00000331898.11 [Q14982-1] ENST00000541867.6 [Q14982-4] Q6B0I4 |