Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 8 studies | 27% ± 8% | |
endothelial cell | 3 studies | 21% ± 5% | |
fibroblast | 3 studies | 17% ± 3% | |
epithelial cell | 3 studies | 37% ± 4% | |
GABAergic neuron | 3 studies | 42% ± 10% | |
glutamatergic neuron | 3 studies | 40% ± 13% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 30% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 10101.56 | 245 / 245 | 99% | 41.50 | 497 / 502 |
pancreas | 100% | 9012.10 | 328 / 328 | 98% | 28.19 | 175 / 178 |
thymus | 100% | 23434.15 | 653 / 653 | 98% | 59.29 | 594 / 605 |
adrenal gland | 100% | 15350.80 | 258 / 258 | 98% | 54.81 | 225 / 230 |
ovary | 100% | 50551.30 | 180 / 180 | 98% | 53.41 | 420 / 430 |
brain | 94% | 5654.07 | 2487 / 2642 | 100% | 55.55 | 703 / 705 |
breast | 100% | 8192.00 | 457 / 459 | 94% | 29.40 | 1054 / 1118 |
skin | 98% | 3971.50 | 1770 / 1809 | 95% | 36.01 | 447 / 472 |
kidney | 100% | 10397.54 | 89 / 89 | 89% | 34.48 | 802 / 901 |
lung | 97% | 5785.38 | 560 / 578 | 79% | 21.81 | 910 / 1155 |
uterus | 100% | 12581.76 | 170 / 170 | 73% | 29.87 | 337 / 459 |
bladder | 100% | 6333.95 | 21 / 21 | 72% | 18.25 | 361 / 504 |
liver | 96% | 2988.58 | 217 / 226 | 67% | 20.52 | 273 / 406 |
esophagus | 91% | 5521.97 | 1317 / 1445 | 62% | 14.71 | 113 / 183 |
stomach | 98% | 5362.81 | 353 / 359 | 37% | 7.74 | 106 / 286 |
intestine | 90% | 4955.91 | 866 / 966 | 32% | 6.84 | 168 / 527 |
eye | 0% | 0 | 0 / 0 | 100% | 54.72 | 80 / 80 |
blood vessel | 100% | 7792.76 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 6860.19 | 1200 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 7373.56 | 797 / 803 | 0% | 0 | 0 / 0 |
spleen | 98% | 4283.16 | 237 / 241 | 0% | 0 | 0 / 0 |
heart | 96% | 12188.40 | 830 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 56% | 8.81 | 25 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.28 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007088 | Biological process | regulation of mitotic nuclear division |
GO_0007030 | Biological process | Golgi organization |
GO_0007010 | Biological process | cytoskeleton organization |
GO_0050775 | Biological process | positive regulation of dendrite morphogenesis |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0055003 | Biological process | cardiac myofibril assembly |
GO_0034067 | Biological process | protein localization to Golgi apparatus |
GO_0005813 | Cellular component | centrosome |
GO_0031430 | Cellular component | M band |
GO_0005829 | Cellular component | cytosol |
GO_0030018 | Cellular component | Z disc |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0014704 | Cellular component | intercalated disc |
GO_0005737 | Cellular component | cytoplasm |
GO_1990393 | Cellular component | 3M complex |
GO_0008093 | Molecular function | cytoskeletal anchor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | OBSL1 |
Protein name | Obscurin-like protein 1 Obscurin like cytoskeletal adaptor 1 OBSL1 protein |
Synonyms | KIAA0657 |
Description | FUNCTION: Core component of the 3M complex, a complex required to regulate microtubule dynamics and genome integrity. It is unclear how the 3M complex regulates microtubules, it could act by controlling the level of a microtubule stabilizer . Acts as a regulator of the Cul7-RING(FBXW8) ubiquitin-protein ligase, playing a critical role in the ubiquitin ligase pathway that regulates Golgi morphogenesis and dendrite patterning in brain. Required to localize CUL7 to the Golgi apparatus in neurons. . |
Accessions | ENST00000456147.1 ENST00000604031.5 ENST00000603926.5 [O75147-4] A8MSZ8 H0Y684 ENST00000373873.8 [O75147-2] S4R463 ENST00000373876.5 Q6P710 A6NN50 ENST00000289656.3 O75147 ENST00000404537.6 [O75147-3] |