Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 24 studies | 44% ± 15% | |
macrophage | 23 studies | 25% ± 8% | |
monocyte | 18 studies | 33% ± 13% | |
non-classical monocyte | 18 studies | 30% ± 12% | |
endothelial cell | 15 studies | 26% ± 10% | |
oligodendrocyte | 11 studies | 28% ± 10% | |
astrocyte | 10 studies | 27% ± 11% | |
microglial cell | 8 studies | 26% ± 8% | |
dendritic cell | 8 studies | 23% ± 13% | |
conventional dendritic cell | 7 studies | 29% ± 15% | |
myeloid cell | 7 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 6 studies | 28% ± 10% | |
fibroblast | 6 studies | 21% ± 7% | |
neutrophil | 5 studies | 38% ± 13% | |
interneuron | 5 studies | 33% ± 21% | |
epithelial cell | 5 studies | 28% ± 9% | |
adipocyte | 5 studies | 21% ± 3% | |
GABAergic neuron | 5 studies | 37% ± 17% | |
glutamatergic neuron | 4 studies | 50% ± 19% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 6% | |
smooth muscle cell | 4 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 21% ± 8% | |
hematopoietic precursor cell | 3 studies | 24% ± 6% | |
granule cell | 3 studies | 17% ± 1% | |
neuron | 3 studies | 28% ± 12% | |
mononuclear phagocyte | 3 studies | 28% ± 10% | |
ciliated cell | 3 studies | 22% ± 3% | |
intermediate monocyte | 3 studies | 51% ± 17% | |
hepatocyte | 3 studies | 30% ± 15% | |
pericyte | 3 studies | 23% ± 7% | |
goblet cell | 3 studies | 32% ± 19% | |
transit amplifying cell | 3 studies | 32% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 3821.05 | 21 / 21 | 100% | 15.35 | 504 / 504 |
breast | 100% | 4467.00 | 459 / 459 | 100% | 21.09 | 1118 / 1118 |
esophagus | 100% | 4168.20 | 1445 / 1445 | 100% | 26.09 | 183 / 183 |
intestine | 100% | 3903.58 | 966 / 966 | 100% | 18.18 | 527 / 527 |
lung | 100% | 3441.89 | 578 / 578 | 100% | 17.37 | 1155 / 1155 |
ovary | 100% | 3931.36 | 180 / 180 | 100% | 18.46 | 430 / 430 |
prostate | 100% | 3647.58 | 245 / 245 | 100% | 17.87 | 502 / 502 |
skin | 100% | 4418.12 | 1809 / 1809 | 100% | 23.24 | 472 / 472 |
stomach | 100% | 3130.67 | 359 / 359 | 100% | 19.59 | 286 / 286 |
thymus | 100% | 4431.24 | 653 / 653 | 100% | 18.02 | 605 / 605 |
uterus | 100% | 4162.60 | 170 / 170 | 100% | 18.36 | 459 / 459 |
kidney | 100% | 5372.94 | 89 / 89 | 100% | 17.28 | 899 / 901 |
liver | 100% | 2002.00 | 226 / 226 | 100% | 10.72 | 405 / 406 |
adrenal gland | 100% | 3017.89 | 258 / 258 | 100% | 13.14 | 229 / 230 |
pancreas | 100% | 2684.18 | 327 / 328 | 99% | 14.22 | 177 / 178 |
brain | 99% | 2236.36 | 2609 / 2642 | 100% | 20.40 | 705 / 705 |
adipose | 100% | 4294.81 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3636.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 25.20 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.45 | 29 / 29 |
muscle | 100% | 3014.34 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 9243.62 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.40 | 1 / 1 |
peripheral blood | 99% | 5498.15 | 920 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 2189.14 | 849 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0046822 | Biological process | regulation of nucleocytoplasmic transport |
GO_0006405 | Biological process | RNA export from nucleus |
GO_0006611 | Biological process | protein export from nucleus |
GO_0006606 | Biological process | protein import into nucleus |
GO_0051726 | Biological process | regulation of cell cycle |
GO_1990876 | Cellular component | cytoplasmic side of nuclear pore |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0005635 | Cellular component | nuclear envelope |
GO_0008139 | Molecular function | nuclear localization sequence binding |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005049 | Molecular function | nuclear export signal receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP214 |
Protein name | Nucleoporin 214 Nuclear pore complex protein Nup214 (214 kDa nucleoporin) (Nucleoporin Nup214) (Protein CAN) Nucleoporin 214 (cDNA, FLJ79316, highly similar to Nuclear pore complex protein Nup214) |
Synonyms | CAIN KIAA0023 CAN |
Description | FUNCTION: Part of the nuclear pore complex . Has a critical role in nucleocytoplasmic transport . May serve as a docking site in the receptor-mediated import of substrates across the nuclear pore complex . .; FUNCTION: (Microbial infection) Required for capsid disassembly of the human adenovirus 5 (HadV-5) leading to release of the viral genome to the nucleus (in vitro). . |
Accessions | ENST00000651022.1 ENST00000359428.10 [P35658-1] ENST00000650694.1 A0A494C0J0 H0Y837 ENST00000530863.1 ENST00000453861.6 H0YED3 H0YF36 ENST00000483497.6 E9PKD2 E9PS86 ENST00000652454.1 H0YDH2 ENST00000476004.5 A0A494C1F2 A0A494BZU9 H0YDI2 ENST00000531584.1 ENST00000411637.6 [P35658-4] ENST00000528406.1 H0YDS4 ENST00000695498.1 A0A494C104 ENST00000498010.2 ENST00000651639.1 ENST00000651334.1 A0A8Q3WLX1 ENST00000531600.1 ENST00000695497.1 A0A494C0Y1 B7ZAV2 P35658 A0A8Q3SHZ4 ENST00000526346.5 |