Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 11 studies | 26% ± 9% | |
glutamatergic neuron | 4 studies | 35% ± 13% | |
epithelial cell | 3 studies | 17% ± 3% | |
ependymal cell | 3 studies | 33% ± 14% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 22% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 26941.41 | 2634 / 2642 | 100% | 199.09 | 704 / 705 |
intestine | 100% | 4556.78 | 965 / 966 | 99% | 68.24 | 522 / 527 |
prostate | 100% | 7466.62 | 244 / 245 | 99% | 36.94 | 497 / 502 |
skin | 98% | 4454.54 | 1774 / 1809 | 98% | 52.22 | 463 / 472 |
kidney | 100% | 6739.76 | 89 / 89 | 96% | 51.99 | 866 / 901 |
breast | 99% | 4333.37 | 456 / 459 | 97% | 37.01 | 1079 / 1118 |
ovary | 97% | 4457.37 | 175 / 180 | 99% | 56.90 | 424 / 430 |
lung | 98% | 4092.22 | 565 / 578 | 97% | 39.53 | 1115 / 1155 |
stomach | 96% | 3880.38 | 344 / 359 | 97% | 79.77 | 276 / 286 |
esophagus | 94% | 4658.54 | 1356 / 1445 | 98% | 62.43 | 180 / 183 |
thymus | 99% | 5485.04 | 648 / 653 | 93% | 29.28 | 561 / 605 |
pancreas | 95% | 4047.37 | 312 / 328 | 97% | 44.92 | 172 / 178 |
uterus | 99% | 5558.79 | 169 / 170 | 91% | 36.42 | 419 / 459 |
bladder | 100% | 4453.10 | 21 / 21 | 86% | 40.06 | 432 / 504 |
adrenal gland | 73% | 2477.93 | 189 / 258 | 83% | 139.51 | 192 / 230 |
liver | 83% | 2908.28 | 187 / 226 | 69% | 19.24 | 282 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 98.91 | 80 / 80 |
blood vessel | 99% | 11546.43 | 1325 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 4769.99 | 1193 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 4202.49 | 236 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 23.84 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 21.69 | 40 / 45 |
heart | 50% | 1440.04 | 433 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 47% | 1828.57 | 433 / 929 | 0% | 0 | 0 / 0 |
muscle | 10% | 247.02 | 79 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0071371 | Biological process | cellular response to gonadotropin stimulus |
GO_0048814 | Biological process | regulation of dendrite morphogenesis |
GO_2001224 | Biological process | positive regulation of neuron migration |
GO_0043523 | Biological process | regulation of neuron apoptotic process |
GO_0048168 | Biological process | regulation of neuronal synaptic plasticity |
GO_0071230 | Biological process | cellular response to amino acid stimulus |
GO_0071257 | Biological process | cellular response to electrical stimulus |
GO_0035307 | Biological process | positive regulation of protein dephosphorylation |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0043204 | Cellular component | perikaryon |
GO_0000791 | Cellular component | euchromatin |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043005 | Cellular component | neuron projection |
GO_0005635 | Cellular component | nuclear envelope |
GO_0030425 | Cellular component | dendrite |
GO_0016363 | Cellular component | nuclear matrix |
GO_0030863 | Cellular component | cortical cytoskeleton |
GO_0045202 | Cellular component | synapse |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005737 | Cellular component | cytoplasm |
GO_0097440 | Cellular component | apical dendrite |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005634 | Cellular component | nucleus |
GO_0048306 | Molecular function | calcium-dependent protein binding |
Gene name | NSMF |
Protein name | NMDA receptor synaptonuclear signaling and neuronal migration factor (Nasal embryonic luteinizing hormone-releasing hormone factor) (Nasal embryonic LHRH factor) NMDA receptor synaptonuclear signaling and neuronal migration factor |
Synonyms | NELF |
Description | FUNCTION: Couples NMDA-sensitive glutamate receptor signaling to the nucleus and triggers long-lasting changes in the cytoarchitecture of dendrites and spine synapse processes. Part of the cAMP response element-binding protein (CREB) shut-off signaling pathway. Stimulates outgrowth of olfactory axons and migration of gonadotropin-releasing hormone (GnRH) and luteinizing-hormone-releasing hormone (LHRH) neuronal cells. . |
Accessions | ENST00000371475.9 [Q6X4W1-1] ENST00000482448.1 ENST00000371472.6 [Q6X4W1-2] ENST00000371473.7 [Q6X4W1-4] ENST00000265663.12 [Q6X4W1-2] ENST00000371474.7 [Q6X4W1-6] Q6X4W1 ENST00000437259.5 [Q6X4W1-3] A0A1B0GUJ1 |