Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 25% ± 8% | |
macrophage | 10 studies | 24% ± 5% | |
oligodendrocyte | 8 studies | 28% ± 9% | |
microglial cell | 7 studies | 27% ± 8% | |
GABAergic neuron | 7 studies | 34% ± 18% | |
plasmacytoid dendritic cell | 6 studies | 22% ± 6% | |
non-classical monocyte | 5 studies | 22% ± 6% | |
fibroblast | 5 studies | 21% ± 5% | |
astrocyte | 5 studies | 31% ± 9% | |
glutamatergic neuron | 5 studies | 47% ± 22% | |
interneuron | 5 studies | 38% ± 21% | |
B cell | 4 studies | 20% ± 7% | |
epithelial cell | 4 studies | 34% ± 13% | |
abnormal cell | 4 studies | 25% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 9% | |
classical monocyte | 3 studies | 21% ± 7% | |
conventional dendritic cell | 3 studies | 31% ± 10% | |
pericyte | 3 studies | 22% ± 5% | |
smooth muscle cell | 3 studies | 17% ± 2% | |
ciliated cell | 3 studies | 23% ± 5% | |
dendritic cell | 3 studies | 30% ± 5% | |
basal cell | 3 studies | 25% ± 8% | |
neuron | 3 studies | 35% ± 8% | |
naive B cell | 3 studies | 17% ± 2% | |
natural killer cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1240.14 | 2642 / 2642 | 100% | 13.54 | 705 / 705 |
breast | 100% | 971.85 | 459 / 459 | 100% | 9.52 | 1114 / 1118 |
lung | 99% | 813.84 | 575 / 578 | 100% | 7.82 | 1154 / 1155 |
ovary | 100% | 866.22 | 180 / 180 | 99% | 8.41 | 427 / 430 |
prostate | 100% | 911.24 | 245 / 245 | 99% | 6.12 | 498 / 502 |
thymus | 100% | 849.87 | 653 / 653 | 99% | 6.52 | 598 / 605 |
uterus | 100% | 1065.72 | 170 / 170 | 99% | 7.63 | 453 / 459 |
liver | 100% | 682.96 | 226 / 226 | 98% | 5.65 | 396 / 406 |
esophagus | 100% | 735.75 | 1445 / 1445 | 97% | 5.35 | 178 / 183 |
stomach | 100% | 619.35 | 359 / 359 | 97% | 5.74 | 276 / 286 |
bladder | 100% | 903.05 | 21 / 21 | 96% | 5.76 | 486 / 504 |
pancreas | 98% | 373.84 | 321 / 328 | 98% | 4.83 | 175 / 178 |
intestine | 100% | 883.77 | 966 / 966 | 95% | 5.22 | 500 / 527 |
kidney | 100% | 775.92 | 89 / 89 | 94% | 6.19 | 849 / 901 |
skin | 100% | 812.21 | 1803 / 1809 | 93% | 7.06 | 440 / 472 |
adrenal gland | 100% | 929.70 | 257 / 258 | 93% | 6.45 | 214 / 230 |
adipose | 100% | 978.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 959.37 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.52 | 29 / 29 |
spleen | 100% | 1288.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.98 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.57 | 1 / 1 |
muscle | 100% | 619.50 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 691.74 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 902.18 | 848 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 69% | 2.98 | 55 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008608 | Biological process | attachment of spindle microtubules to kinetochore |
GO_0051301 | Biological process | cell division |
GO_0000070 | Biological process | mitotic sister chromatid segregation |
GO_0016607 | Cellular component | nuclear speck |
GO_0000776 | Cellular component | kinetochore |
GO_0005829 | Cellular component | cytosol |
GO_0000922 | Cellular component | spindle pole |
GO_0000444 | Cellular component | MIS12/MIND type complex |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | NSL1 |
Protein name | Kinetochore-associated protein NSL1 homolog NSL1 component of MIS12 kinetochore complex |
Synonyms | DC8 C1orf48 DC31 MIS14 |
Description | FUNCTION: Part of the MIS12 complex which is required for normal chromosome alignment and segregation and kinetochore formation during mitosis. . |
Accessions | ENST00000626725.1 [Q96IY1-2] Q5SY74 ENST00000366977.8 [Q96IY1-1] Q5SY76 Q96IY1 ENST00000366976.3 ENST00000366978.5 |