Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 7 studies | 32% ± 14% | |
neuron | 6 studies | 29% ± 13% | |
epithelial cell of proximal tubule | 5 studies | 22% ± 9% | |
abnormal cell | 4 studies | 22% ± 8% | |
GABAergic neuron | 4 studies | 29% ± 14% | |
glutamatergic neuron | 4 studies | 37% ± 15% | |
connective tissue cell | 3 studies | 24% ± 5% | |
enteroendocrine cell | 3 studies | 32% ± 11% | |
intestinal crypt stem cell | 3 studies | 21% ± 4% | |
progenitor cell | 3 studies | 34% ± 3% | |
dendritic cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 8039.78 | 226 / 226 | 100% | 146.29 | 405 / 406 |
ovary | 100% | 2023.22 | 180 / 180 | 99% | 83.36 | 426 / 430 |
thymus | 100% | 1975.52 | 653 / 653 | 99% | 56.95 | 599 / 605 |
brain | 100% | 2984.32 | 2635 / 2642 | 99% | 62.68 | 697 / 705 |
pancreas | 99% | 1187.17 | 326 / 328 | 99% | 50.17 | 176 / 178 |
kidney | 100% | 4957.01 | 89 / 89 | 98% | 89.72 | 885 / 901 |
prostate | 99% | 1670.28 | 243 / 245 | 98% | 66.47 | 492 / 502 |
intestine | 100% | 1696.03 | 963 / 966 | 97% | 71.75 | 513 / 527 |
uterus | 100% | 1414.28 | 170 / 170 | 97% | 63.82 | 445 / 459 |
stomach | 100% | 1453.64 | 358 / 359 | 96% | 58.11 | 275 / 286 |
breast | 95% | 1369.57 | 437 / 459 | 100% | 86.20 | 1114 / 1118 |
skin | 99% | 2031.79 | 1794 / 1809 | 95% | 59.06 | 448 / 472 |
bladder | 95% | 1466.67 | 20 / 21 | 99% | 78.54 | 498 / 504 |
lung | 94% | 1130.87 | 545 / 578 | 99% | 80.93 | 1140 / 1155 |
esophagus | 98% | 1255.09 | 1422 / 1445 | 95% | 38.84 | 173 / 183 |
adrenal gland | 100% | 3807.24 | 258 / 258 | 90% | 41.37 | 206 / 230 |
spleen | 100% | 1470.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 65.08 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 37.96 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 98% | 39.94 | 78 / 80 |
blood vessel | 97% | 892.41 | 1291 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 40.37 | 28 / 29 |
adipose | 93% | 805.73 | 1114 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 1952.26 | 816 / 929 | 0% | 0 | 0 / 0 |
heart | 88% | 1027.44 | 754 / 861 | 0% | 0 | 0 / 0 |
muscle | 8% | 40.64 | 67 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0019233 | Biological process | sensory perception of pain |
GO_0000423 | Biological process | mitophagy |
GO_0097060 | Cellular component | synaptic membrane |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | NIPSNAP1 |
Protein name | Protein NipSnap homolog 1 (NipSnap1) Nipsnap homolog 1 |
Synonyms | |
Description | |
Accessions | ENST00000455496.1 Q9BPW8 ENST00000216121.12 ENST00000437094.5 ENST00000415100.5 C9JDV8 H7C2U6 F8WCR5 |