Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 8 studies | 32% ± 13% | |
oligodendrocyte precursor cell | 7 studies | 29% ± 13% | |
interneuron | 6 studies | 35% ± 23% | |
GABAergic neuron | 6 studies | 38% ± 17% | |
endothelial cell | 5 studies | 28% ± 17% | |
neuron | 5 studies | 39% ± 21% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 5% | |
mesothelial cell | 3 studies | 30% ± 9% | |
retinal cone cell | 3 studies | 26% ± 8% | |
glutamatergic neuron | 3 studies | 40% ± 20% | |
epithelial cell | 3 studies | 19% ± 4% | |
type I pneumocyte | 3 studies | 22% ± 7% | |
oligodendrocyte | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 3026.53 | 653 / 653 | 98% | 17.02 | 590 / 605 |
kidney | 100% | 3702.51 | 89 / 89 | 96% | 13.90 | 862 / 901 |
esophagus | 100% | 1215.25 | 1443 / 1445 | 95% | 12.27 | 174 / 183 |
breast | 99% | 1267.03 | 455 / 459 | 93% | 10.29 | 1042 / 1118 |
pancreas | 99% | 834.09 | 324 / 328 | 93% | 9.12 | 166 / 178 |
uterus | 100% | 2599.89 | 170 / 170 | 90% | 13.21 | 415 / 459 |
adrenal gland | 100% | 2506.48 | 258 / 258 | 89% | 8.08 | 205 / 230 |
lung | 99% | 1281.99 | 573 / 578 | 90% | 11.37 | 1036 / 1155 |
prostate | 100% | 2779.90 | 245 / 245 | 84% | 8.22 | 424 / 502 |
ovary | 100% | 5203.30 | 180 / 180 | 83% | 8.69 | 355 / 430 |
brain | 99% | 1812.06 | 2607 / 2642 | 79% | 6.79 | 555 / 705 |
liver | 97% | 1397.27 | 219 / 226 | 78% | 8.40 | 315 / 406 |
skin | 91% | 691.70 | 1651 / 1809 | 81% | 10.11 | 382 / 472 |
stomach | 100% | 1496.83 | 359 / 359 | 61% | 6.73 | 174 / 286 |
bladder | 95% | 997.29 | 20 / 21 | 62% | 7.58 | 310 / 504 |
intestine | 96% | 1922.17 | 930 / 966 | 48% | 4.22 | 255 / 527 |
spleen | 100% | 1564.24 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.46 | 1 / 1 |
adipose | 99% | 1048.88 | 1188 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.63 | 43 / 45 |
blood vessel | 93% | 1236.62 | 1247 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 8.00 | 71 / 80 |
heart | 84% | 762.39 | 719 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 34% | 2.15 | 10 / 29 |
muscle | 16% | 74.94 | 128 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 9.83 | 17 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034454 | Biological process | microtubule anchoring at centrosome |
GO_0005813 | Cellular component | centrosome |
GO_0005829 | Cellular component | cytosol |
GO_0005874 | Cellular component | microtubule |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NINL |
Protein name | Ninein like Ninein-like protein |
Synonyms | KIAA0980 NLP |
Description | FUNCTION: Involved in the microtubule organization in interphase cells. Overexpression induces the fragmentation of the Golgi, and causes lysosomes to disperse toward the cell periphery; it also interferes with mitotic spindle assembly. Involved in vesicle transport in photoreceptor cells (By similarity). May play a role in ovarian carcinogenesis. . |
Accessions | ENST00000336104.6 ENST00000706725.1 A0A9L9PYA0 A0A9L9PXF7 H0Y2V7 ENST00000278886.11 [Q9Y2I6-1] ENST00000706726.1 Q9Y2I6 |