Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 20% ± 4% | |
rod bipolar cell | 3 studies | 66% ± 15% | |
glutamatergic neuron | 3 studies | 21% ± 4% |
Insufficient scRNA-seq data for expression of NIF3L1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 738.89 | 180 / 180 | 100% | 54.47 | 430 / 430 |
stomach | 100% | 840.35 | 359 / 359 | 100% | 41.93 | 286 / 286 |
breast | 100% | 910.13 | 459 / 459 | 100% | 45.86 | 1117 / 1118 |
esophagus | 100% | 830.32 | 1443 / 1445 | 100% | 35.36 | 183 / 183 |
bladder | 100% | 811.52 | 21 / 21 | 100% | 41.63 | 503 / 504 |
uterus | 100% | 881.51 | 170 / 170 | 100% | 48.86 | 458 / 459 |
brain | 100% | 899.05 | 2634 / 2642 | 100% | 44.17 | 705 / 705 |
skin | 100% | 1163.17 | 1809 / 1809 | 100% | 42.73 | 470 / 472 |
intestine | 100% | 909.63 | 965 / 966 | 100% | 45.81 | 525 / 527 |
prostate | 100% | 723.00 | 245 / 245 | 99% | 33.85 | 499 / 502 |
thymus | 100% | 801.95 | 653 / 653 | 99% | 33.44 | 600 / 605 |
liver | 100% | 571.34 | 226 / 226 | 99% | 25.29 | 402 / 406 |
kidney | 100% | 769.78 | 89 / 89 | 99% | 28.18 | 891 / 901 |
pancreas | 99% | 539.98 | 326 / 328 | 99% | 30.99 | 177 / 178 |
adrenal gland | 100% | 1233.95 | 258 / 258 | 97% | 29.52 | 224 / 230 |
lung | 97% | 685.02 | 561 / 578 | 100% | 45.73 | 1155 / 1155 |
adipose | 100% | 775.32 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 41.98 | 29 / 29 |
spleen | 100% | 1151.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 47.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 24.68 | 1 / 1 |
muscle | 100% | 836.32 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 759.80 | 1331 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 26.35 | 77 / 80 |
heart | 95% | 608.52 | 816 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 80% | 593.77 | 747 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030182 | Biological process | neuron differentiation |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NIF3L1 |
Protein name | NIF3-like protein 1 NIF3-like protein 1 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 1 protein) |
Synonyms | ALS2CR1 My018 MDS015 |
Description | FUNCTION: May function as a transcriptional corepressor through its interaction with COPS2, negatively regulating the expression of genes involved in neuronal differentiation. . FUNCTION: May function as a transcriptional corepressor through its interaction with COPS2, negatively regulating the expression of genes involved in neuronal differentiation. . |
Accessions | E7EXA3 H7C1A8 ENST00000651500.1 [Q9GZT8-1] ENST00000426253.5 C9JN42 ENST00000454952.1 ENST00000409357.5 [Q9GZT8-1] ENST00000409588.1 [Q9GZT8-3] Q6X734 B8ZZI0 ENST00000436412.1 ENST00000409020.6 [Q9GZT8-1] ENST00000359683.8 [Q9GZT8-2] ENST00000409129.2 Q9GZT8 |