Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 9 studies | 52% ± 29% | |
pericyte | 9 studies | 25% ± 11% | |
adipocyte | 9 studies | 40% ± 12% | |
smooth muscle cell | 9 studies | 30% ± 10% | |
fibroblast | 7 studies | 32% ± 14% | |
endothelial cell | 6 studies | 34% ± 17% | |
interneuron | 6 studies | 55% ± 30% | |
astrocyte | 6 studies | 26% ± 12% | |
glutamatergic neuron | 5 studies | 41% ± 18% | |
amacrine cell | 4 studies | 47% ± 23% | |
Mueller cell | 4 studies | 28% ± 9% | |
club cell | 4 studies | 26% ± 7% | |
basal cell | 4 studies | 36% ± 16% | |
GABAergic interneuron | 3 studies | 46% ± 13% | |
epithelial cell | 3 studies | 36% ± 13% | |
GABAergic amacrine cell | 3 studies | 62% ± 13% | |
glycinergic amacrine cell | 3 studies | 41% ± 12% | |
retinal ganglion cell | 3 studies | 36% ± 11% | |
respiratory goblet cell | 3 studies | 47% ± 21% | |
mesothelial cell | 3 studies | 41% ± 18% | |
mucus secreting cell | 3 studies | 24% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 99% | 885.86 | 1432 / 1445 | 96% | 7.49 | 176 / 183 |
kidney | 100% | 1779.52 | 89 / 89 | 94% | 8.71 | 844 / 901 |
bladder | 100% | 1623.33 | 21 / 21 | 88% | 4.74 | 446 / 504 |
uterus | 100% | 1918.98 | 170 / 170 | 88% | 4.70 | 403 / 459 |
breast | 100% | 1257.01 | 458 / 459 | 88% | 4.04 | 980 / 1118 |
stomach | 99% | 756.11 | 355 / 359 | 88% | 6.48 | 253 / 286 |
adrenal gland | 100% | 1596.07 | 258 / 258 | 84% | 3.41 | 194 / 230 |
intestine | 96% | 1206.88 | 929 / 966 | 88% | 4.76 | 464 / 527 |
lung | 88% | 455.11 | 510 / 578 | 93% | 5.61 | 1075 / 1155 |
brain | 89% | 589.07 | 2346 / 2642 | 89% | 3.05 | 624 / 705 |
ovary | 100% | 1348.68 | 180 / 180 | 72% | 2.08 | 308 / 430 |
prostate | 100% | 1508.98 | 245 / 245 | 65% | 1.57 | 326 / 502 |
thymus | 100% | 1196.78 | 650 / 653 | 58% | 1.80 | 353 / 605 |
skin | 96% | 792.92 | 1735 / 1809 | 19% | 0.62 | 92 / 472 |
pancreas | 13% | 46.52 | 44 / 328 | 94% | 5.91 | 167 / 178 |
adipose | 100% | 1131.55 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2414.78 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.65 | 1 / 1 |
spleen | 88% | 348.06 | 213 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 3.10 | 39 / 45 |
heart | 45% | 152.85 | 386 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.23 | 5 / 29 |
muscle | 8% | 26.85 | 63 / 803 | 0% | 0 | 0 / 0 |
liver | 1% | 2.10 | 2 / 226 | 7% | 0.16 | 28 / 406 |
peripheral blood | 7% | 25.48 | 67 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002088 | Biological process | lens development in camera-type eye |
GO_0030154 | Biological process | cell differentiation |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0030054 | Cellular component | cell junction |
GO_0016604 | Cellular component | nuclear body |
GO_0030027 | Cellular component | lamellipodium |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0005925 | Cellular component | focal adhesion |
Gene name | NHS |
Protein name | Actin remodeling regulator NHS (Congenital cataracts and dental anomalies protein) (Nance-Horan syndrome protein) NHS actin remodeling regulator |
Synonyms | |
Description | FUNCTION: May function in cell morphology by maintaining the integrity of the circumferential actin ring and controlling lamellipod formation. Involved in the regulation eye, tooth, brain and craniofacial development. . |
Accessions | ENST00000380060.7 [Q6T4R5-2] ENST00000676302.1 [Q6T4R5-1] ENST00000398097.7 [Q6T4R5-3] A0A3B3ITB2 Q6T4R5 ENST00000617601.4 A0A087WU78 ENST00000648929.1 |