Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 3972.71 | 21 / 21 | 100% | 27.83 | 504 / 504 |
esophagus | 100% | 3535.44 | 1445 / 1445 | 100% | 26.42 | 183 / 183 |
intestine | 100% | 4462.39 | 966 / 966 | 100% | 26.09 | 527 / 527 |
lung | 100% | 3877.85 | 578 / 578 | 100% | 25.27 | 1155 / 1155 |
ovary | 100% | 3345.39 | 180 / 180 | 100% | 19.78 | 430 / 430 |
prostate | 100% | 3691.94 | 245 / 245 | 100% | 18.53 | 502 / 502 |
skin | 100% | 3355.35 | 1809 / 1809 | 100% | 22.48 | 472 / 472 |
uterus | 100% | 3937.41 | 170 / 170 | 100% | 31.07 | 459 / 459 |
breast | 100% | 3496.42 | 459 / 459 | 100% | 29.53 | 1117 / 1118 |
stomach | 100% | 3187.39 | 359 / 359 | 100% | 24.91 | 285 / 286 |
kidney | 100% | 3028.24 | 89 / 89 | 99% | 18.95 | 894 / 901 |
thymus | 100% | 3356.34 | 653 / 653 | 99% | 16.29 | 600 / 605 |
pancreas | 100% | 1994.43 | 327 / 328 | 98% | 22.20 | 175 / 178 |
brain | 96% | 2093.11 | 2544 / 2642 | 100% | 21.54 | 705 / 705 |
liver | 100% | 2002.35 | 226 / 226 | 93% | 10.61 | 378 / 406 |
adrenal gland | 100% | 2436.48 | 258 / 258 | 87% | 7.95 | 200 / 230 |
adipose | 100% | 3243.57 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 40.93 | 29 / 29 |
muscle | 100% | 2501.35 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6364.38 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.97 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.23 | 1 / 1 |
blood vessel | 100% | 2787.53 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1868.64 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 2751.39 | 887 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 10.62 | 74 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001816 | Biological process | cytokine production |
GO_0016925 | Biological process | protein sumoylation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
Gene name | NFATC2IP |
Protein name | NFATC2-interacting protein (Nuclear factor of activated T-cells, cytoplasmic 2-interacting protein) NFATC2-interacting protein (45 kDa NF-AT-interacting protein) (45 kDa NFAT-interacting protein) (Nuclear factor of activated T-cells, cytoplasmic 2-interacting protein) |
Synonyms | NIP45 |
Description | FUNCTION: In T-helper 2 (Th2) cells, regulates the magnitude of NFAT-driven transcription of a specific subset of cytokine genes, including IL3, IL4, IL5 and IL13, but not IL2. Recruits PRMT1 to the IL4 promoter; this leads to enhancement of histone H4 'Arg-3'-methylation and facilitates subsequent histone acetylation at the IL4 locus, thus promotes robust cytokine expression (By similarity). Down-regulates formation of poly-SUMO chains by UBE2I/UBC9 (By similarity). . |
Accessions | Q8NCF5 ENST00000320805.9 [Q8NCF5-1] ENST00000564978.5 ENST00000568148.1 [Q8NCF5-3] H3BSZ7 |