Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 72% ± 21% | |
endothelial cell | 15 studies | 52% ± 21% | |
oligodendrocyte precursor cell | 14 studies | 52% ± 22% | |
type I pneumocyte | 10 studies | 53% ± 28% | |
GABAergic neuron | 10 studies | 61% ± 28% | |
glutamatergic neuron | 10 studies | 64% ± 26% | |
ciliated cell | 8 studies | 32% ± 10% | |
retinal ganglion cell | 7 studies | 68% ± 27% | |
type II pneumocyte | 6 studies | 49% ± 22% | |
epithelial cell | 6 studies | 43% ± 22% | |
interneuron | 6 studies | 62% ± 27% | |
retina horizontal cell | 6 studies | 69% ± 24% | |
cardiac muscle cell | 6 studies | 88% ± 9% | |
fibroblast | 5 studies | 42% ± 15% | |
podocyte | 5 studies | 65% ± 31% | |
neuron | 5 studies | 39% ± 11% | |
retinal bipolar neuron | 5 studies | 45% ± 25% | |
microglial cell | 5 studies | 39% ± 23% | |
endothelial cell of artery | 5 studies | 24% ± 6% | |
mesothelial cell | 5 studies | 39% ± 13% | |
smooth muscle cell | 5 studies | 41% ± 10% | |
respiratory goblet cell | 4 studies | 39% ± 15% | |
granule cell | 4 studies | 65% ± 23% | |
retinal cone cell | 4 studies | 47% ± 22% | |
OFF-bipolar cell | 4 studies | 76% ± 22% | |
club cell | 4 studies | 37% ± 12% | |
cholangiocyte | 3 studies | 49% ± 21% | |
pericyte | 3 studies | 48% ± 5% | |
GABAergic interneuron | 3 studies | 62% ± 20% | |
squamous epithelial cell | 3 studies | 49% ± 18% | |
ON-bipolar cell | 3 studies | 51% ± 31% | |
amacrine cell | 3 studies | 40% ± 8% | |
rod bipolar cell | 3 studies | 70% ± 27% | |
basal cell | 3 studies | 30% ± 5% | |
retinal pigment epithelial cell | 3 studies | 33% ± 14% | |
ependymal cell | 3 studies | 86% ± 3% | |
goblet cell | 3 studies | 45% ± 28% | |
oligodendrocyte | 3 studies | 36% ± 24% | |
kidney loop of Henle epithelial cell | 3 studies | 33% ± 13% | |
mucus secreting cell | 3 studies | 46% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12226.65 | 2641 / 2642 | 94% | 25.62 | 665 / 705 |
thymus | 100% | 8579.43 | 651 / 653 | 92% | 25.51 | 558 / 605 |
prostate | 94% | 3605.74 | 231 / 245 | 92% | 11.05 | 461 / 502 |
lung | 99% | 6492.71 | 574 / 578 | 76% | 9.99 | 879 / 1155 |
kidney | 96% | 3743.43 | 85 / 89 | 70% | 10.42 | 632 / 901 |
breast | 57% | 2426.89 | 262 / 459 | 97% | 31.28 | 1086 / 1118 |
pancreas | 50% | 987.77 | 163 / 328 | 76% | 7.43 | 136 / 178 |
esophagus | 38% | 1954.82 | 547 / 1445 | 73% | 12.11 | 134 / 183 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.45 | 1 / 1 |
heart | 99% | 64176.70 | 852 / 861 | 0% | 0 | 0 / 0 |
bladder | 24% | 445.14 | 5 / 21 | 68% | 10.06 | 342 / 504 |
adrenal gland | 19% | 542.24 | 50 / 258 | 71% | 18.90 | 164 / 230 |
intestine | 2% | 36.38 | 16 / 966 | 87% | 15.92 | 458 / 527 |
stomach | 16% | 298.34 | 59 / 359 | 62% | 11.97 | 178 / 286 |
skin | 72% | 3628.70 | 1311 / 1809 | 3% | 0.54 | 16 / 472 |
tonsil | 0% | 0 | 0 / 0 | 73% | 9.18 | 33 / 45 |
uterus | 2% | 87.54 | 4 / 170 | 60% | 8.40 | 277 / 459 |
ovary | 1% | 21.84 | 2 / 180 | 14% | 0.97 | 60 / 430 |
liver | 1% | 17.19 | 2 / 226 | 11% | 1.08 | 45 / 406 |
adipose | 10% | 202.78 | 116 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.25 | 1 / 29 |
blood vessel | 2% | 193.97 | 32 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.11 | 1 / 80 |
peripheral blood | 0% | 1.72 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0071691 | Biological process | cardiac muscle thin filament assembly |
GO_0001725 | Cellular component | stress fiber |
GO_0031674 | Cellular component | I band |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030018 | Cellular component | Z disc |
GO_0005523 | Molecular function | tropomyosin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0008092 | Molecular function | cytoskeletal protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0008307 | Molecular function | structural constituent of muscle |
GO_0031005 | Molecular function | filamin binding |
Gene name | NEBL |
Protein name | Nebulette variant 4 Nebulette (Actin-binding Z-disk protein) NEBL protein Nebulette variant 6 Nebulette |
Synonyms | C10orf113 LNEBL |
Description | FUNCTION: Binds to actin and plays an important role in the assembly of the Z-disk. May functionally link sarcomeric actin to the desmin intermediate filaments in the heart muscle sarcomeres . Isoform 2 might play a role in the assembly of focal adhesion . . |
Accessions | O76041 ENST00000481592.5 A0A0U1RRI4 A0A0U1RRK0 ENST00000473616.5 B0YJ47 ENST00000377122.9 [O76041-1] ENST00000417816.2 [O76041-2] A0A0U1RQY0 ENST00000460652.1 Q5JUU8 ENST00000676125.1 A0A6Q8PF21 Q2TBD1 |