Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 28% ± 8% | |
plasmablast | 4 studies | 39% ± 23% | |
plasmacytoid dendritic cell | 4 studies | 23% ± 4% | |
classical monocyte | 3 studies | 21% ± 4% | |
dendritic cell | 3 studies | 22% ± 7% | |
abnormal cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3481.62 | 1445 / 1445 | 100% | 106.50 | 183 / 183 |
pancreas | 100% | 4720.55 | 328 / 328 | 100% | 69.57 | 178 / 178 |
uterus | 100% | 4005.52 | 170 / 170 | 100% | 84.38 | 458 / 459 |
ovary | 100% | 3305.30 | 180 / 180 | 100% | 49.41 | 429 / 430 |
liver | 100% | 4702.27 | 226 / 226 | 100% | 68.11 | 405 / 406 |
stomach | 100% | 3619.31 | 359 / 359 | 100% | 119.36 | 285 / 286 |
skin | 100% | 5095.49 | 1809 / 1809 | 100% | 113.71 | 470 / 472 |
thymus | 100% | 4131.55 | 653 / 653 | 100% | 45.64 | 602 / 605 |
intestine | 100% | 4713.98 | 966 / 966 | 99% | 132.56 | 524 / 527 |
prostate | 100% | 4564.06 | 245 / 245 | 99% | 77.94 | 498 / 502 |
adrenal gland | 100% | 9066.51 | 258 / 258 | 99% | 96.63 | 228 / 230 |
kidney | 100% | 3605.31 | 89 / 89 | 99% | 51.65 | 893 / 901 |
brain | 99% | 3165.74 | 2620 / 2642 | 100% | 55.83 | 704 / 705 |
bladder | 100% | 4098.00 | 21 / 21 | 99% | 99.42 | 498 / 504 |
lung | 100% | 5379.82 | 578 / 578 | 99% | 80.58 | 1141 / 1155 |
breast | 100% | 3698.59 | 459 / 459 | 98% | 62.68 | 1101 / 1118 |
adipose | 100% | 3746.30 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 90.51 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 78.93 | 29 / 29 |
spleen | 100% | 6356.28 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 87.37 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 69.78 | 1 / 1 |
blood vessel | 100% | 2993.40 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2707.48 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2521.80 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 4996.06 | 918 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043254 | Biological process | regulation of protein-containing complex assembly |
GO_0061635 | Biological process | regulation of protein complex stability |
GO_0009966 | Biological process | regulation of signal transduction |
GO_0003140 | Biological process | determination of left/right asymmetry in lateral mesoderm |
GO_1900108 | Biological process | negative regulation of nodal signaling pathway |
GO_0050821 | Biological process | protein stabilization |
GO_0160063 | Biological process | multi-pass transmembrane protein insertion into ER membrane |
GO_0160064 | Cellular component | multi-pass translocon complex |
GO_0032991 | Cellular component | protein-containing complex |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0043022 | Molecular function | ribosome binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NCLN |
Protein name | BOS complex subunit NCLN (Nicalin) (Nicastrin-like protein) BOS complex subunit NCLN (Nicalin) Nicalin |
Synonyms | hCG_23630 |
Description | FUNCTION: Component of the multi-pass translocon (MPT) complex that mediates insertion of multi-pass membrane proteins into the lipid bilayer of membranes . The MPT complex takes over after the SEC61 complex: following membrane insertion of the first few transmembrane segments of proteins by the SEC61 complex, the MPT complex occludes the lateral gate of the SEC61 complex to promote insertion of subsequent transmembrane regions . May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning, via its interaction with NOMO (By similarity). . |
Accessions | K7EMW4 Q969V3 K7ELZ9 K7ENM2 A0A0C4DGP7 ENST00000587740.5 ENST00000590671.5 K7EQ66 ENST00000586904.1 ENST00000592737.5 ENST00000592235.1 ENST00000246117.9 [Q969V3-1] ENST00000588428.5 K7EN96 |