NCCRP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
squamous epithelial cell	4 studies	58% ± 17%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	40%	13022.56	571 / 1445	58%	88.08	106 / 183
tonsil	0%	0	0 / 0	96%	108.30	43 / 45
skin	72%	15628.30	1297 / 1809	23%	22.83	108 / 472
uterus	1%	309.63	2 / 170	69%	107.20	318 / 459
bladder	0%	0	0 / 21	54%	68.46	271 / 504
eye	0%	0	0 / 0	50%	4.47	40 / 80
lung	0%	0	0 / 578	44%	20.00	511 / 1155
breast	1%	10.04	3 / 459	41%	26.68	453 / 1118
pancreas	6%	90.59	19 / 328	29%	15.09	52 / 178
ovary	0%	0	0 / 180	33%	8.52	143 / 430
lymph node	0%	0	0 / 0	10%	0.62	3 / 29
stomach	1%	35.31	3 / 359	9%	1.98	27 / 286
prostate	2%	30.11	4 / 245	8%	0.85	39 / 502
thymus	0%	0	0 / 653	9%	0.96	53 / 605
intestine	0%	0	0 / 966	9%	9.96	45 / 527
kidney	1%	16.76	1 / 89	2%	1.70	19 / 901
liver	0%	0	0 / 226	1%	0.58	6 / 406
brain	0%	0	0 / 2642	1%	0.08	4 / 705
adipose	0%	14.76	5 / 1204	0%	0	0 / 0
muscle	0%	9.86	2 / 803	0%	0	0 / 0
peripheral blood	0%	3.06	1 / 929	0%	0	0 / 0
blood vessel	0%	8.99	1 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0	0 / 230
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1