Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 18 studies | 71% ± 19% | |
oligodendrocyte | 15 studies | 88% ± 8% | |
oligodendrocyte precursor cell | 15 studies | 86% ± 15% | |
GABAergic neuron | 11 studies | 68% ± 16% | |
glutamatergic neuron | 11 studies | 75% ± 15% | |
fibroblast | 10 studies | 36% ± 10% | |
neuron | 8 studies | 43% ± 20% | |
microglial cell | 7 studies | 43% ± 20% | |
interneuron | 6 studies | 64% ± 19% | |
endothelial cell | 5 studies | 56% ± 21% | |
macrophage | 3 studies | 33% ± 9% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 80% ± 10% | |
GABAergic interneuron | 3 studies | 60% ± 2% | |
glial cell | 3 studies | 67% ± 5% | |
granule cell | 3 studies | 52% ± 33% | |
pericyte | 3 studies | 28% ± 7% | |
retinal pigment epithelial cell | 3 studies | 21% ± 4% | |
ependymal cell | 3 studies | 63% ± 17% | |
Schwann cell | 3 studies | 63% ± 27% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 17 studies | 67% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 3253.50 | 2628 / 2642 | 99% | 43.95 | 696 / 705 |
adrenal gland | 100% | 1684.67 | 258 / 258 | 78% | 20.85 | 179 / 230 |
lung | 96% | 895.07 | 555 / 578 | 37% | 1.98 | 432 / 1155 |
breast | 21% | 84.35 | 97 / 459 | 64% | 9.46 | 714 / 1118 |
intestine | 59% | 387.48 | 574 / 966 | 5% | 0.16 | 26 / 527 |
prostate | 32% | 148.10 | 78 / 245 | 31% | 2.87 | 154 / 502 |
esophagus | 48% | 246.25 | 695 / 1445 | 8% | 0.32 | 15 / 183 |
heart | 47% | 242.65 | 407 / 861 | 0% | 0 | 0 / 0 |
skin | 2% | 7.01 | 36 / 1809 | 32% | 2.52 | 153 / 472 |
stomach | 25% | 136.21 | 88 / 359 | 7% | 0.25 | 21 / 286 |
uterus | 9% | 40.39 | 16 / 170 | 18% | 1.57 | 81 / 459 |
bladder | 14% | 71.43 | 3 / 21 | 9% | 0.64 | 47 / 504 |
eye | 0% | 0 | 0 / 0 | 23% | 0.98 | 18 / 80 |
liver | 15% | 95.77 | 35 / 226 | 5% | 0.30 | 20 / 406 |
pancreas | 0% | 0 | 0 / 328 | 15% | 0.52 | 26 / 178 |
blood vessel | 14% | 76.11 | 183 / 1335 | 0% | 0 | 0 / 0 |
adipose | 12% | 47.27 | 144 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.48 | 4 / 45 |
ovary | 4% | 16.57 | 8 / 180 | 3% | 0.11 | 14 / 430 |
lymph node | 0% | 0 | 0 / 0 | 7% | 1.21 | 2 / 29 |
thymus | 2% | 5.19 | 10 / 653 | 4% | 0.23 | 26 / 605 |
kidney | 0% | 0 | 0 / 89 | 3% | 0.15 | 26 / 901 |
spleen | 1% | 3.97 | 3 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 1.73 | 4 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.35 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007158 | Biological process | neuron cell-cell adhesion |
GO_0007413 | Biological process | axonal fasciculation |
GO_0030424 | Cellular component | axon |
GO_0016604 | Cellular component | nuclear body |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0042802 | Molecular function | identical protein binding |
Gene name | NCAM2 |
Protein name | Neural cell adhesion molecule 2 (N-CAM-2) (NCAM-2) Neural cell adhesion molecule 2 Alternative protein NCAM2 |
Synonyms | NCAM21 |
Description | FUNCTION: May play important roles in selective fasciculation and zone-to-zone projection of the primary olfactory axons. |
Accessions | H9KV31 L0R512 ENST00000284894.8 O15394 ENST00000400546.6 [O15394-1] |