Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 31% ± 11% | |
pericyte | 15 studies | 29% ± 10% | |
oligodendrocyte precursor cell | 14 studies | 52% ± 20% | |
glutamatergic neuron | 11 studies | 57% ± 23% | |
smooth muscle cell | 11 studies | 30% ± 13% | |
fibroblast | 10 studies | 25% ± 12% | |
ciliated cell | 9 studies | 31% ± 15% | |
GABAergic neuron | 8 studies | 49% ± 28% | |
astrocyte | 8 studies | 41% ± 18% | |
neuron | 7 studies | 42% ± 16% | |
ionocyte | 5 studies | 36% ± 8% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 29% ± 14% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 28% ± 17% | |
T cell | 5 studies | 27% ± 4% | |
natural killer cell | 5 studies | 46% ± 16% | |
epithelial cell | 4 studies | 38% ± 13% | |
interneuron | 4 studies | 62% ± 26% | |
retinal pigment epithelial cell | 4 studies | 25% ± 10% | |
Mueller cell | 4 studies | 40% ± 19% | |
capillary endothelial cell | 4 studies | 42% ± 17% | |
connective tissue cell | 3 studies | 26% ± 9% | |
GABAergic interneuron | 3 studies | 41% ± 17% | |
granule cell | 3 studies | 19% ± 4% | |
amacrine cell | 3 studies | 20% ± 2% | |
retinal cone cell | 3 studies | 21% ± 3% | |
lymphocyte | 3 studies | 40% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 4236.96 | 180 / 180 | 90% | 12.60 | 385 / 430 |
brain | 90% | 4673.06 | 2367 / 2642 | 99% | 33.49 | 700 / 705 |
breast | 97% | 2094.06 | 446 / 459 | 86% | 13.25 | 963 / 1118 |
kidney | 92% | 1137.47 | 82 / 89 | 86% | 10.65 | 777 / 901 |
prostate | 89% | 920.19 | 218 / 245 | 87% | 16.15 | 439 / 502 |
lung | 100% | 2447.00 | 577 / 578 | 70% | 6.63 | 812 / 1155 |
skin | 89% | 1920.40 | 1613 / 1809 | 68% | 8.93 | 323 / 472 |
intestine | 92% | 2278.72 | 888 / 966 | 62% | 4.41 | 328 / 527 |
liver | 93% | 916.36 | 210 / 226 | 61% | 5.34 | 248 / 406 |
pancreas | 49% | 333.18 | 161 / 328 | 89% | 8.87 | 159 / 178 |
bladder | 90% | 1546.90 | 19 / 21 | 43% | 3.29 | 217 / 504 |
uterus | 84% | 793.56 | 142 / 170 | 49% | 8.03 | 225 / 459 |
esophagus | 82% | 1745.06 | 1180 / 1445 | 47% | 3.21 | 86 / 183 |
stomach | 60% | 1314.84 | 217 / 359 | 62% | 3.97 | 177 / 286 |
thymus | 81% | 745.93 | 527 / 653 | 35% | 1.98 | 211 / 605 |
adrenal gland | 28% | 197.56 | 73 / 258 | 73% | 15.93 | 168 / 230 |
blood vessel | 100% | 2889.63 | 1329 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 1071.95 | 809 / 861 | 0% | 0 | 0 / 0 |
adipose | 93% | 1466.60 | 1121 / 1204 | 0% | 0 | 0 / 0 |
spleen | 81% | 611.08 | 196 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 13.21 | 65 / 80 |
lymph node | 0% | 0 | 0 / 0 | 76% | 7.61 | 22 / 29 |
tonsil | 0% | 0 | 0 / 0 | 60% | 5.81 | 27 / 45 |
muscle | 54% | 383.70 | 432 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 44% | 604.71 | 405 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0003073 | Biological process | regulation of systemic arterial blood pressure |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0030130 | Cellular component | clathrin coat of trans-Golgi network vesicle |
GO_0005829 | Cellular component | cytosol |
GO_0030276 | Molecular function | clathrin binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0015631 | Molecular function | tubulin binding |
Gene name | NCALD |
Protein name | Neurocalcin-delta Neurocalcin delta |
Synonyms | hCG_16241 |
Description | FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . FUNCTION: May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions. . |
Accessions | ENST00000519508.6 E5RHC8 ENST00000522448.5 E5RIG4 E5RI78 ENST00000517822.5 ENST00000220931.11 E5RIZ1 E5RJJ6 E5RGZ0 ENST00000519098.5 ENST00000518661.5 ENST00000522078.5 E5RFL9 ENST00000520690.5 E5RIA5 ENST00000311028.4 P61601 ENST00000522951.5 E5RI95 E5RJA1 E5RK89 E5RIX3 ENST00000524209.5 E5RJF1 ENST00000517531.5 ENST00000518727.5 E5RHE8 ENST00000520425.5 E5RJT1 ENST00000521964.5 ENST00000522252.5 ENST00000523923.5 ENST00000522206.5 ENST00000395923.5 E5RGA9 ENST00000524137.5 B2RB70 ENST00000518166.5 ENST00000520346.1 ENST00000521599.5 A0A1B0GXG3 |