I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 6 studies | 38% ± 18% | |
| retinal ganglion cell | 4 studies | 45% ± 26% | |
| GABAergic neuron | 4 studies | 42% ± 8% | |
| neuron | 3 studies | 26% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 6 studies | 38% ± 18% | |
| retinal ganglion cell | 4 studies | 45% ± 26% | |
| GABAergic neuron | 4 studies | 42% ± 8% | |
| neuron | 3 studies | 26% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 4634.01 | 2630 / 2642 | 96% | 40.63 | 675 / 705 |
| prostate | 88% | 556.10 | 216 / 245 | 99% | 27.21 | 495 / 502 |
| thymus | 86% | 471.30 | 562 / 653 | 93% | 15.80 | 564 / 605 |
| adrenal gland | 58% | 267.10 | 150 / 258 | 88% | 30.57 | 202 / 230 |
| kidney | 72% | 314.73 | 64 / 89 | 53% | 5.63 | 477 / 901 |
| bladder | 81% | 319.33 | 17 / 21 | 24% | 1.59 | 123 / 504 |
| uterus | 76% | 398.24 | 130 / 170 | 15% | 1.30 | 70 / 459 |
| esophagus | 56% | 275.90 | 802 / 1445 | 36% | 3.11 | 65 / 183 |
| blood vessel | 83% | 487.81 | 1113 / 1335 | 0% | 0 | 0 / 0 |
| ovary | 65% | 295.88 | 117 / 180 | 15% | 0.77 | 65 / 430 |
| breast | 34% | 140.84 | 157 / 459 | 40% | 3.10 | 452 / 1118 |
| spleen | 67% | 273.75 | 162 / 241 | 0% | 0 | 0 / 0 |
| intestine | 59% | 274.51 | 568 / 966 | 5% | 0.40 | 25 / 527 |
| pancreas | 13% | 45.51 | 44 / 328 | 47% | 3.92 | 83 / 178 |
| lung | 8% | 28.02 | 49 / 578 | 46% | 4.11 | 528 / 1155 |
| heart | 53% | 273.04 | 460 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 38% | 3.82 | 30 / 80 |
| stomach | 30% | 169.64 | 108 / 359 | 6% | 0.43 | 17 / 286 |
| skin | 28% | 105.91 | 511 / 1809 | 7% | 0.75 | 35 / 472 |
| lymph node | 0% | 0 | 0 / 0 | 28% | 1.79 | 8 / 29 |
| liver | 0% | 1.47 | 1 / 226 | 25% | 2.14 | 103 / 406 |
| adipose | 13% | 46.53 | 153 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 9% | 1.55 | 4 / 45 |
| peripheral blood | 8% | 38.06 | 73 / 929 | 0% | 0 | 0 / 0 |
| muscle | 4% | 15.36 | 30 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0030182 | Biological process | neuron differentiation |
| GO_0045666 | Biological process | positive regulation of neuron differentiation |
| GO_2000035 | Biological process | regulation of stem cell division |
| GO_0006334 | Biological process | nucleosome assembly |
| GO_0000785 | Cellular component | chromatin |
| GO_0005634 | Cellular component | nucleus |
| GO_0035034 | Molecular function | histone acetyltransferase regulator activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0042393 | Molecular function | histone binding |
| GO_0003682 | Molecular function | chromatin binding |
| Gene name | NAP1L2 |
| Protein name | Nucleosome assembly protein 1-like 2 (Brain-specific protein, X-linked) Alternative protein NAP1L2 |
| Synonyms | BPX |
| Description | FUNCTION: Acidic protein which may be involved in interactions with other proteins or DNA. . |
| Accessions | ENST00000373517.4 [Q9ULW6-1] Q9ULW6 L8E8P2 |
