Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 22% ± 7% | |
pericyte | 5 studies | 22% ± 3% | |
epithelial cell | 4 studies | 29% ± 8% | |
basal cell | 4 studies | 25% ± 10% | |
microglial cell | 3 studies | 17% ± 2% | |
smooth muscle cell | 3 studies | 16% ± 1% | |
ciliated cell | 3 studies | 22% ± 0% | |
GABAergic neuron | 3 studies | 28% ± 2% | |
glutamatergic neuron | 3 studies | 50% ± 9% | |
goblet cell | 3 studies | 33% ± 19% | |
oligodendrocyte | 3 studies | 22% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 33% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3608.61 | 1445 / 1445 | 100% | 53.30 | 183 / 183 |
ovary | 100% | 2638.29 | 180 / 180 | 99% | 42.88 | 426 / 430 |
lung | 100% | 2664.80 | 576 / 578 | 99% | 30.17 | 1145 / 1155 |
brain | 99% | 2385.92 | 2626 / 2642 | 99% | 31.28 | 699 / 705 |
stomach | 100% | 2072.51 | 358 / 359 | 97% | 29.67 | 278 / 286 |
intestine | 100% | 2998.77 | 966 / 966 | 97% | 27.58 | 510 / 527 |
uterus | 100% | 3541.39 | 170 / 170 | 97% | 33.32 | 443 / 459 |
thymus | 100% | 4307.32 | 653 / 653 | 96% | 38.20 | 583 / 605 |
breast | 100% | 3679.83 | 459 / 459 | 95% | 23.09 | 1059 / 1118 |
kidney | 100% | 1823.57 | 89 / 89 | 94% | 29.22 | 848 / 901 |
bladder | 100% | 2568.95 | 21 / 21 | 93% | 22.69 | 467 / 504 |
skin | 100% | 4524.57 | 1809 / 1809 | 93% | 31.53 | 437 / 472 |
pancreas | 93% | 1006.19 | 304 / 328 | 98% | 27.66 | 174 / 178 |
adrenal gland | 100% | 1988.35 | 258 / 258 | 87% | 17.66 | 200 / 230 |
prostate | 100% | 2607.85 | 245 / 245 | 86% | 12.66 | 434 / 502 |
liver | 100% | 1599.95 | 226 / 226 | 79% | 12.24 | 322 / 406 |
adipose | 100% | 3564.65 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4545.95 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2081.02 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.38 | 1 / 1 |
heart | 99% | 2227.17 | 856 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 37.43 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 83% | 22.33 | 24 / 29 |
eye | 0% | 0 | 0 / 0 | 63% | 9.75 | 50 / 80 |
peripheral blood | 52% | 1013.35 | 479 / 929 | 0% | 0 | 0 / 0 |
muscle | 42% | 358.95 | 339 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0014037 | Biological process | Schwann cell differentiation |
GO_0001958 | Biological process | endochondral ossification |
GO_0045682 | Biological process | regulation of epidermis development |
GO_0042552 | Biological process | myelination |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008134 | Molecular function | transcription factor binding |
GO_0003712 | Molecular function | transcription coregulator activity |
Gene name | NAB1 |
Protein name | NGFI-A-binding protein 1 (EGR-1-binding protein 1) (Transcriptional regulatory protein p54) NGFI-A binding protein 1 |
Synonyms | hCG_25796 |
Description | FUNCTION: Acts as a transcriptional repressor for zinc finger transcription factors EGR1 and EGR2. . |
Accessions | C9JFF6 ENST00000337386.10 [Q13506-1] ENST00000409581.5 [Q13506-1] ENST00000426601.1 ENST00000448811.1 C9J3V0 C9JJ42 C9JID4 ENST00000423076.1 Q13506 ENST00000416973.1 H0Y4C5 ENST00000423376.1 C9JL92 ENST00000434473.1 ENST00000409641.5 B8ZZS2 |