Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 19 studies | 26% ± 11% | |
endothelial cell | 18 studies | 30% ± 14% | |
basal cell | 15 studies | 39% ± 20% | |
smooth muscle cell | 13 studies | 27% ± 9% | |
ciliated cell | 12 studies | 27% ± 10% | |
non-classical monocyte | 12 studies | 24% ± 7% | |
pericyte | 12 studies | 34% ± 15% | |
macrophage | 12 studies | 22% ± 6% | |
club cell | 11 studies | 30% ± 11% | |
epithelial cell | 11 studies | 39% ± 22% | |
type I pneumocyte | 10 studies | 37% ± 16% | |
microglial cell | 10 studies | 37% ± 16% | |
respiratory goblet cell | 8 studies | 34% ± 12% | |
secretory cell | 8 studies | 31% ± 16% | |
type II pneumocyte | 7 studies | 35% ± 11% | |
myeloid cell | 7 studies | 23% ± 9% | |
monocyte | 7 studies | 25% ± 9% | |
vein endothelial cell | 6 studies | 29% ± 18% | |
adipocyte | 5 studies | 26% ± 11% | |
alveolar macrophage | 5 studies | 31% ± 11% | |
classical monocyte | 4 studies | 19% ± 2% | |
cardiac muscle cell | 4 studies | 19% ± 3% | |
dendritic cell | 4 studies | 22% ± 4% | |
connective tissue cell | 4 studies | 18% ± 3% | |
myofibroblast cell | 4 studies | 30% ± 12% | |
goblet cell | 4 studies | 31% ± 6% | |
endothelial cell of artery | 4 studies | 27% ± 4% | |
hillock cell | 3 studies | 44% ± 12% | |
ionocyte | 3 studies | 36% ± 12% | |
mesothelial cell | 3 studies | 33% ± 7% | |
endothelial cell of vascular tree | 3 studies | 38% ± 10% | |
muscle cell | 3 studies | 35% ± 18% | |
adventitial cell | 3 studies | 22% ± 7% | |
kidney loop of Henle epithelial cell | 3 studies | 19% ± 2% | |
myoepithelial cell | 3 studies | 33% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 14796.42 | 459 / 459 | 98% | 111.74 | 1094 / 1118 |
esophagus | 100% | 11882.81 | 1445 / 1445 | 97% | 102.77 | 178 / 183 |
lung | 100% | 10115.43 | 576 / 578 | 97% | 93.27 | 1121 / 1155 |
bladder | 100% | 17821.48 | 21 / 21 | 96% | 80.57 | 484 / 504 |
intestine | 98% | 8074.81 | 949 / 966 | 94% | 57.59 | 494 / 527 |
thymus | 100% | 9376.82 | 653 / 653 | 90% | 80.95 | 545 / 605 |
uterus | 100% | 11232.55 | 170 / 170 | 90% | 75.10 | 413 / 459 |
ovary | 88% | 3689.33 | 158 / 180 | 92% | 63.40 | 396 / 430 |
kidney | 87% | 4321.58 | 77 / 89 | 93% | 73.70 | 835 / 901 |
prostate | 100% | 10142.14 | 245 / 245 | 74% | 31.45 | 372 / 502 |
stomach | 76% | 4640.21 | 272 / 359 | 92% | 56.75 | 264 / 286 |
skin | 100% | 23553.84 | 1809 / 1809 | 58% | 27.61 | 274 / 472 |
pancreas | 20% | 528.52 | 65 / 328 | 95% | 101.66 | 169 / 178 |
adrenal gland | 86% | 4503.28 | 221 / 258 | 21% | 7.33 | 48 / 230 |
adipose | 100% | 13003.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 14932.63 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 31.23 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 91% | 63.01 | 41 / 45 |
heart | 71% | 2671.03 | 610 / 861 | 0% | 0 | 0 / 0 |
spleen | 42% | 1165.13 | 101 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 38% | 13.41 | 11 / 29 |
brain | 6% | 162.01 | 151 / 2642 | 31% | 9.77 | 216 / 705 |
eye | 0% | 0 | 0 / 0 | 21% | 6.89 | 17 / 80 |
liver | 3% | 88.65 | 6 / 226 | 14% | 8.07 | 57 / 406 |
muscle | 13% | 413.30 | 107 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 4% | 124.98 | 36 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001778 | Biological process | plasma membrane repair |
GO_0008015 | Biological process | blood circulation |
GO_0006936 | Biological process | muscle contraction |
GO_0046928 | Biological process | regulation of neurotransmitter secretion |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005901 | Cellular component | caveola |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0034451 | Cellular component | centriolar satellite |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0005543 | Molecular function | phospholipid binding |
Gene name | MYOF |
Protein name | Myoferlin (Fer-1-like protein 3) Myoferlin |
Synonyms | KIAA1207 FER1L3 |
Description | FUNCTION: Calcium/phospholipid-binding protein that plays a role in the plasmalemma repair mechanism of endothelial cells that permits rapid resealing of membranes disrupted by mechanical stress. Involved in endocytic recycling. Implicated in VEGF signal transduction by regulating the levels of the receptor KDR (By similarity). . |
Accessions | ENST00000371489.5 [Q9NZM1-7] H0YD14 ENST00000463743.5 ENST00000359263.9 [Q9NZM1-1] ENST00000358334.9 [Q9NZM1-6] Q9NZM1 ENST00000371488.3 [Q9NZM1-4] |