Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| fibroblast | 24 studies | 29% ± 10% | |
| endothelial cell | 18 studies | 30% ± 11% | |
| pericyte | 17 studies | 49% ± 21% | |
| smooth muscle cell | 16 studies | 45% ± 19% | |
| astrocyte | 12 studies | 31% ± 17% | |
| capillary endothelial cell | 10 studies | 42% ± 18% | |
| endothelial cell of artery | 7 studies | 50% ± 26% | |
| vein endothelial cell | 6 studies | 37% ± 21% | |
| myofibroblast cell | 5 studies | 33% ± 8% | |
| enterocyte | 5 studies | 31% ± 14% | |
| endothelial cell of vascular tree | 5 studies | 51% ± 18% | |
| glomerular endothelial cell | 4 studies | 53% ± 2% | |
| goblet cell | 4 studies | 30% ± 15% | |
| transit amplifying cell | 4 studies | 30% ± 17% | |
| adventitial cell | 4 studies | 44% ± 7% | |
| mesothelial cell | 4 studies | 49% ± 16% | |
| epithelial cell | 4 studies | 34% ± 12% | |
| hepatocyte | 4 studies | 65% ± 27% | |
| luminal cell of prostate epithelium | 4 studies | 26% ± 5% | |
| intestinal crypt stem cell | 3 studies | 41% ± 19% | |
| adipocyte | 3 studies | 19% ± 1% | |
| Mueller cell | 3 studies | 35% ± 24% | |
| connective tissue cell | 3 studies | 37% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 88% | 1777.75 | 2317 / 2642 | 96% | 99.28 | 676 / 705 |
| prostate | 78% | 1580.04 | 191 / 245 | 91% | 115.70 | 459 / 502 |
| pancreas | 74% | 1406.39 | 243 / 328 | 91% | 59.43 | 162 / 178 |
| thymus | 88% | 1773.75 | 577 / 653 | 52% | 24.93 | 314 / 605 |
| lung | 90% | 3023.45 | 521 / 578 | 46% | 15.38 | 528 / 1155 |
| liver | 92% | 7851.00 | 209 / 226 | 43% | 139.72 | 174 / 406 |
| stomach | 92% | 1933.21 | 329 / 359 | 40% | 12.91 | 115 / 286 |
| breast | 93% | 3678.58 | 427 / 459 | 35% | 16.02 | 387 / 1118 |
| kidney | 65% | 1004.08 | 58 / 89 | 39% | 28.90 | 349 / 901 |
| intestine | 58% | 919.03 | 557 / 966 | 45% | 21.46 | 239 / 527 |
| skin | 64% | 877.54 | 1156 / 1809 | 38% | 19.92 | 181 / 472 |
| adipose | 97% | 6103.12 | 1167 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 94% | 2519.65 | 1252 / 1335 | 0% | 0 | 0 / 0 |
| bladder | 57% | 707.43 | 12 / 21 | 33% | 17.10 | 165 / 504 |
| uterus | 34% | 477.16 | 57 / 170 | 54% | 26.00 | 247 / 459 |
| esophagus | 49% | 674.19 | 710 / 1445 | 32% | 15.59 | 59 / 183 |
| ovary | 26% | 294.57 | 47 / 180 | 49% | 25.34 | 211 / 430 |
| adrenal gland | 29% | 216.97 | 76 / 258 | 27% | 15.29 | 62 / 230 |
| lymph node | 0% | 0 | 0 / 0 | 52% | 32.70 | 15 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 47% | 18.21 | 21 / 45 |
| heart | 35% | 419.77 | 299 / 861 | 0% | 0 | 0 / 0 |
| muscle | 34% | 632.71 | 277 / 803 | 0% | 0 | 0 / 0 |
| spleen | 11% | 69.23 | 26 / 241 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 10% | 3.51 | 8 / 80 |
| peripheral blood | 2% | 51.17 | 19 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0071294 | Biological process | cellular response to zinc ion |
| GO_0071276 | Biological process | cellular response to cadmium ion |
| GO_0071280 | Biological process | cellular response to copper ion |
| GO_0010273 | Biological process | detoxification of copper ion |
| GO_0045926 | Biological process | negative regulation of growth |
| GO_0006882 | Biological process | intracellular zinc ion homeostasis |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0005515 | Molecular function | protein binding |
| GO_0008270 | Molecular function | zinc ion binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | MT1M |
| Protein name | Metallothionein Metallothionein-1M (MT-1M) (Metallothionein-IM) (MT-IM) |
| Synonyms | MT1K |
| Description | FUNCTION: Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids. FUNCTION: Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids. . |
| Accessions | ENST00000379818.4 ENST00000570233.1 Q8N339 H3BUC6 |