Name | Number of supported studies | Average coverage | |
---|---|---|---|
respiratory goblet cell | 6 studies | 61% ± 8% | |
secretory cell | 6 studies | 30% ± 12% | |
basal cell | 6 studies | 27% ± 14% | |
club cell | 4 studies | 51% ± 4% | |
deuterosomal cell | 4 studies | 39% ± 8% | |
duct epithelial cell | 4 studies | 34% ± 7% | |
ciliated cell | 4 studies | 27% ± 15% | |
luminal cell of prostate epithelium | 4 studies | 73% ± 9% | |
epithelial cell | 3 studies | 45% ± 20% | |
mucus secreting cell | 3 studies | 70% ± 30% | |
serous secreting cell | 3 studies | 25% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 99% | 103522.54 | 242 / 245 | 100% | 6138.55 | 500 / 502 |
stomach | 62% | 798.75 | 221 / 359 | 24% | 77.64 | 68 / 286 |
skin | 68% | 376.54 | 1227 / 1809 | 1% | 0.63 | 5 / 472 |
lung | 32% | 464.83 | 186 / 578 | 29% | 111.03 | 332 / 1155 |
bladder | 38% | 115.62 | 8 / 21 | 15% | 34.75 | 74 / 504 |
breast | 9% | 166.17 | 42 / 459 | 23% | 90.18 | 258 / 1118 |
esophagus | 9% | 58.12 | 130 / 1445 | 14% | 28.27 | 25 / 183 |
pancreas | 2% | 11.08 | 7 / 328 | 18% | 23.04 | 32 / 178 |
uterus | 4% | 4.79 | 6 / 170 | 12% | 8.08 | 56 / 459 |
tonsil | 0% | 0 | 0 / 0 | 16% | 18.01 | 7 / 45 |
intestine | 2% | 15.55 | 17 / 966 | 9% | 18.74 | 49 / 527 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.96 | 1 / 29 |
thymus | 2% | 9.06 | 12 / 653 | 1% | 0.33 | 6 / 605 |
adipose | 3% | 6.71 | 33 / 1204 | 0% | 0 | 0 / 0 |
liver | 1% | 1.18 | 3 / 226 | 1% | 0.71 | 5 / 406 |
ovary | 2% | 1.44 | 3 / 180 | 0% | 0.21 | 2 / 430 |
kidney | 1% | 2.63 | 1 / 89 | 0% | 0.29 | 3 / 901 |
heart | 1% | 2.18 | 12 / 861 | 0% | 0 | 0 / 0 |
muscle | 1% | 2.26 | 8 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 33.27 | 12 / 1335 | 0% | 0 | 0 / 0 |
spleen | 1% | 0.51 | 2 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 1% | 0.41 | 2 / 258 | 0% | 0 | 0 / 230 |
peripheral blood | 1% | 10.94 | 6 / 929 | 0% | 0 | 0 / 0 |
brain | 1% | 1.01 | 15 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0005615 | Cellular component | extracellular space |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | MSMB |
Protein name | Beta-microseminoprotein (Immunoglobulin-binding factor) (IGBF) (PN44) (Prostate secreted seminal plasma protein) (Prostate secretory protein of 94 amino acids) (PSP-94) (PSP94) (Seminal plasma beta-inhibin) Beta-microseminoprotein |
Synonyms | PRSP |
Description | |
Accessions | ENST00000582163.3 [P08118-1] ENST00000581478.5 [P08118-2] A0A590UJG9 P08118 ENST00000663171.1 |