Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 22% ± 4% | |
epithelial cell | 7 studies | 27% ± 10% | |
microglial cell | 5 studies | 18% ± 4% | |
adipocyte | 5 studies | 19% ± 4% | |
astrocyte | 5 studies | 29% ± 10% | |
oligodendrocyte | 5 studies | 22% ± 5% | |
oligodendrocyte precursor cell | 5 studies | 24% ± 6% | |
hematopoietic precursor cell | 4 studies | 22% ± 8% | |
ciliated cell | 3 studies | 21% ± 2% | |
GABAergic neuron | 3 studies | 44% ± 3% | |
glutamatergic neuron | 3 studies | 57% ± 6% | |
dendritic cell | 3 studies | 27% ± 7% | |
endothelial cell of lymphatic vessel | 3 studies | 18% ± 2% | |
transit amplifying cell | 3 studies | 32% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3638.14 | 1445 / 1445 | 100% | 24.94 | 183 / 183 |
prostate | 100% | 3713.36 | 245 / 245 | 100% | 35.83 | 502 / 502 |
stomach | 100% | 2814.22 | 359 / 359 | 100% | 32.92 | 286 / 286 |
breast | 100% | 3672.56 | 459 / 459 | 100% | 39.48 | 1117 / 1118 |
bladder | 100% | 4117.05 | 21 / 21 | 100% | 31.65 | 503 / 504 |
skin | 100% | 4784.17 | 1809 / 1809 | 100% | 39.47 | 471 / 472 |
uterus | 100% | 3926.39 | 170 / 170 | 100% | 34.43 | 458 / 459 |
kidney | 100% | 2965.07 | 89 / 89 | 100% | 34.25 | 899 / 901 |
ovary | 100% | 4193.07 | 180 / 180 | 100% | 22.95 | 429 / 430 |
liver | 100% | 2766.66 | 226 / 226 | 100% | 26.09 | 405 / 406 |
pancreas | 100% | 2088.84 | 327 / 328 | 100% | 26.22 | 178 / 178 |
thymus | 100% | 3720.39 | 653 / 653 | 100% | 39.23 | 603 / 605 |
brain | 100% | 2671.11 | 2633 / 2642 | 100% | 40.20 | 705 / 705 |
lung | 99% | 2604.02 | 575 / 578 | 100% | 29.08 | 1155 / 1155 |
intestine | 100% | 3388.26 | 966 / 966 | 99% | 38.74 | 524 / 527 |
adrenal gland | 100% | 4726.44 | 258 / 258 | 98% | 29.66 | 226 / 230 |
adipose | 100% | 3579.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3603.62 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 45.76 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 46.84 | 29 / 29 |
muscle | 100% | 4426.88 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3545.70 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 38.53 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.48 | 1 / 1 |
heart | 98% | 3944.26 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 82% | 2335.91 | 762 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070131 | Biological process | positive regulation of mitochondrial translation |
GO_0032543 | Biological process | mitochondrial translation |
GO_0008283 | Biological process | cell population proliferation |
GO_0005730 | Cellular component | nucleolus |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005763 | Cellular component | mitochondrial small ribosomal subunit |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0000049 | Molecular function | tRNA binding |
GO_0019843 | Molecular function | rRNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0097177 | Molecular function | mitochondrial ribosome binding |
Gene name | MRPS27 |
Protein name | MRPS27 protein Small ribosomal subunit protein mS27 (28S ribosomal protein S27, mitochondrial) (MRP-S27) (S27mt) (Mitochondrial ribosomal protein S27) Mitochondrial ribosomal protein S27 |
Synonyms | hCG_37853 KIAA0264 |
Description | FUNCTION: RNA-binding component of the mitochondrial small ribosomal subunit (mt-SSU) that plays a role in mitochondrial protein synthesis . Stimulates mitochondrial mRNA translation of subunit components of the mitochondrial electron transport chain . Binds to the mitochondrial 12S rRNA (12S mt-rRNA) and tRNA(Glu) . Involved also in positive regulation of cell proliferation and tumor cell growth . . |
Accessions | ENST00000694990.1 [Q92552-1] ENST00000694989.1 [Q92552-1] ENST00000695001.1 A0A8Q3SHR4 ENST00000522562.5 A0A8Q3WKI2 A0A8Q3WKS8 ENST00000695000.1 Q92552 ENST00000522404.5 A0A8Q3WKM3 ENST00000695404.1 A0A8Q3WLW2 ENST00000694997.1 ENST00000695403.1 ENST00000508863.6 ENST00000694996.2 Q6PKB3 A0A8Q3WL16 ENST00000506957.1 A0A8Q3WK88 ENST00000694995.1 ENST00000694994.1 ENST00000513900.6 [Q92552-2] ENST00000519143.6 D6RH20 A0A8Q3WK82 A0A8Q3WKF1 ENST00000694998.2 G5EA06 ENST00000695298.1 ENST00000261413.10 [Q92552-1] A0A8Q3WLL6 A0A8Q3WKI8 A0A8Q3WKZ8 ENST00000523654.6 ENST00000457646.9 A0A8Q3WKH0 |