Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 28 studies | 36% ± 16% | |
astrocyte | 18 studies | 36% ± 19% | |
oligodendrocyte | 14 studies | 45% ± 17% | |
pericyte | 13 studies | 26% ± 11% | |
oligodendrocyte precursor cell | 12 studies | 43% ± 19% | |
ciliated cell | 12 studies | 31% ± 14% | |
smooth muscle cell | 11 studies | 28% ± 10% | |
GABAergic neuron | 11 studies | 48% ± 26% | |
glutamatergic neuron | 11 studies | 51% ± 27% | |
fibroblast | 11 studies | 34% ± 14% | |
endothelial cell of lymphatic vessel | 10 studies | 39% ± 16% | |
adipocyte | 6 studies | 24% ± 5% | |
Mueller cell | 6 studies | 28% ± 14% | |
neuron | 5 studies | 33% ± 15% | |
interneuron | 5 studies | 59% ± 31% | |
cardiac muscle cell | 5 studies | 32% ± 8% | |
granule cell | 4 studies | 36% ± 12% | |
microglial cell | 4 studies | 39% ± 13% | |
retinal cone cell | 4 studies | 24% ± 7% | |
retinal pigment epithelial cell | 4 studies | 42% ± 22% | |
capillary endothelial cell | 4 studies | 25% ± 7% | |
vein endothelial cell | 4 studies | 36% ± 24% | |
epithelial cell | 4 studies | 31% ± 11% | |
endothelial cell of vascular tree | 4 studies | 38% ± 16% | |
hepatocyte | 4 studies | 48% ± 11% | |
type I pneumocyte | 4 studies | 21% ± 7% | |
abnormal cell | 3 studies | 24% ± 9% | |
GABAergic interneuron | 3 studies | 50% ± 5% | |
glial cell | 3 studies | 25% ± 8% | |
progenitor cell | 3 studies | 35% ± 3% | |
endothelial cell of artery | 3 studies | 18% ± 1% | |
connective tissue cell | 3 studies | 22% ± 7% | |
ependymal cell | 3 studies | 63% ± 12% | |
myofibroblast cell | 3 studies | 29% ± 13% | |
mesothelial cell | 3 studies | 46% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4265.60 | 2637 / 2642 | 99% | 32.50 | 701 / 705 |
prostate | 100% | 4603.00 | 244 / 245 | 97% | 14.23 | 485 / 502 |
breast | 100% | 5017.70 | 459 / 459 | 95% | 13.10 | 1057 / 1118 |
thymus | 100% | 3505.75 | 652 / 653 | 89% | 10.36 | 541 / 605 |
kidney | 100% | 2096.88 | 89 / 89 | 88% | 9.89 | 790 / 901 |
adrenal gland | 100% | 2616.80 | 258 / 258 | 85% | 10.32 | 195 / 230 |
liver | 97% | 3555.04 | 220 / 226 | 84% | 11.44 | 342 / 406 |
lung | 99% | 3349.75 | 574 / 578 | 73% | 5.61 | 838 / 1155 |
skin | 80% | 1931.60 | 1452 / 1809 | 89% | 12.98 | 418 / 472 |
ovary | 100% | 6040.93 | 180 / 180 | 62% | 4.16 | 268 / 430 |
bladder | 100% | 4457.14 | 21 / 21 | 53% | 3.65 | 269 / 504 |
uterus | 99% | 6179.48 | 169 / 170 | 48% | 4.55 | 221 / 459 |
esophagus | 79% | 4000.95 | 1143 / 1445 | 55% | 4.40 | 101 / 183 |
intestine | 85% | 3973.15 | 823 / 966 | 22% | 1.53 | 116 / 527 |
pancreas | 33% | 357.53 | 109 / 328 | 74% | 5.54 | 131 / 178 |
stomach | 66% | 2279.89 | 236 / 359 | 38% | 2.85 | 110 / 286 |
adipose | 100% | 5872.56 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7477.02 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2873.35 | 802 / 803 | 0% | 0 | 0 / 0 |
spleen | 98% | 2118.25 | 235 / 241 | 0% | 0 | 0 / 0 |
heart | 97% | 4423.21 | 839 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 12.01 | 72 / 80 |
tonsil | 0% | 0 | 0 / 0 | 27% | 1.64 | 12 / 45 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.45 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0120192 | Biological process | tight junction assembly |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0016327 | Cellular component | apicolateral plasma membrane |
GO_0030425 | Cellular component | dendrite |
GO_0045177 | Cellular component | apical part of cell |
GO_0005886 | Cellular component | plasma membrane |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0005515 | Molecular function | protein binding |
Gene name | MPDZ |
Protein name | Multiple PDZ domain protein (Multi-PDZ domain protein 1) Multiple PDZ domain crumbs cell polarity complex component (cDNA, FLJ79388, highly similar to Multiple PDZ domain protein) Multiple PDZ domain crumbs cell polarity complex component |
Synonyms | MUPP1 |
Description | FUNCTION: Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses . Promotes clustering of HT2RC at the cell surface (By similarity). . |
Accessions | H3BM19 ENST00000541718.5 [O75970-2] H0YGQ3 A0A075B6R8 O75970 F5H1U9 ENST00000536827.5 [O75970-5] ENST00000542806.5 ENST00000535169.1 ENST00000538841.5 F8WDQ8 ENST00000546205.5 ENST00000433359.6 ENST00000319217.12 [O75970-1] H0YF96 F5H8D6 B7ZB24 ENST00000545857.5 H0YH70 ENST00000437441.2 ENST00000494251.1 ENST00000438511.5 ENST00000447879.6 [O75970-3] ENST00000542239.1 H0YFZ6 |