Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 9 studies | 34% ± 16% | |
epithelial cell | 5 studies | 23% ± 4% | |
endothelial cell | 3 studies | 23% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 4% | |
Schwann cell | 3 studies | 27% ± 4% |
Insufficient scRNA-seq data for expression of MICALL2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2581.44 | 1445 / 1445 | 99% | 23.16 | 182 / 183 |
prostate | 100% | 4282.20 | 245 / 245 | 99% | 17.93 | 499 / 502 |
intestine | 100% | 4856.81 | 966 / 966 | 99% | 21.00 | 521 / 527 |
bladder | 100% | 3735.19 | 21 / 21 | 98% | 20.58 | 494 / 504 |
stomach | 100% | 3939.11 | 359 / 359 | 98% | 19.41 | 280 / 286 |
lung | 100% | 3581.75 | 577 / 578 | 96% | 19.45 | 1110 / 1155 |
thymus | 100% | 2537.58 | 653 / 653 | 94% | 13.70 | 570 / 605 |
uterus | 95% | 1494.21 | 161 / 170 | 96% | 19.94 | 442 / 459 |
pancreas | 91% | 1116.68 | 300 / 328 | 98% | 34.38 | 175 / 178 |
breast | 97% | 1770.58 | 445 / 459 | 93% | 12.80 | 1035 / 1118 |
brain | 98% | 2042.30 | 2596 / 2642 | 90% | 15.84 | 636 / 705 |
adrenal gland | 100% | 7401.76 | 258 / 258 | 85% | 9.40 | 195 / 230 |
skin | 99% | 1624.65 | 1792 / 1809 | 85% | 17.81 | 401 / 472 |
kidney | 100% | 2506.62 | 89 / 89 | 80% | 11.49 | 723 / 901 |
liver | 96% | 1472.64 | 217 / 226 | 66% | 8.42 | 269 / 406 |
ovary | 34% | 332.45 | 62 / 180 | 75% | 8.25 | 321 / 430 |
spleen | 100% | 9997.63 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.50 | 1 / 1 |
blood vessel | 99% | 2597.71 | 1328 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 19.80 | 44 / 45 |
adipose | 97% | 1581.18 | 1167 / 1204 | 0% | 0 | 0 / 0 |
heart | 89% | 1446.58 | 770 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 6.40 | 22 / 29 |
eye | 0% | 0 | 0 / 0 | 63% | 5.15 | 50 / 80 |
muscle | 17% | 134.21 | 133 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 17.62 | 22 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031175 | Biological process | neuron projection development |
GO_0030041 | Biological process | actin filament polymerization |
GO_0032456 | Biological process | endocytic recycling |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0034446 | Biological process | substrate adhesion-dependent cell spreading |
GO_0070830 | Biological process | bicellular tight junction assembly |
GO_1903955 | Biological process | positive regulation of protein targeting to mitochondrion |
GO_0005886 | Cellular component | plasma membrane |
GO_0055037 | Cellular component | recycling endosome |
GO_0043005 | Cellular component | neuron projection |
GO_0005911 | Cellular component | cell-cell junction |
GO_0001725 | Cellular component | stress fiber |
GO_0005829 | Cellular component | cytosol |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0032432 | Cellular component | actin filament bundle |
GO_0031005 | Molecular function | filamin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0042805 | Molecular function | actinin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MICALL2 |
Protein name | MICAL-like protein 2 (Junctional Rab13-binding protein) (Molecule interacting with CasL-like 2) (MICAL-L2) |
Synonyms | JRAB |
Description | FUNCTION: Effector of small Rab GTPases which is involved in junctional complexes assembly through the regulation of cell adhesion molecules transport to the plasma membrane and actin cytoskeleton reorganization. Regulates the endocytic recycling of occludins, claudins and E-cadherin to the plasma membrane and may thereby regulate the establishment of tight junctions and adherens junctions. In parallel, may regulate actin cytoskeleton reorganization directly through interaction with F-actin or indirectly through actinins and filamins. Most probably involved in the processes of epithelial cell differentiation, cell spreading and neurite outgrowth (By similarity). . |
Accessions | ENST00000413446.5 [Q8IY33-2] ENST00000297508.8 [Q8IY33-1] Q8IY33 |