Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 43 studies | 45% ± 16% | |
conventional dendritic cell | 24 studies | 34% ± 16% | |
classical monocyte | 23 studies | 33% ± 9% | |
monocyte | 19 studies | 29% ± 10% | |
non-classical monocyte | 19 studies | 33% ± 8% | |
myeloid cell | 16 studies | 37% ± 12% | |
dendritic cell | 12 studies | 37% ± 14% | |
platelet | 10 studies | 39% ± 15% | |
microglial cell | 10 studies | 29% ± 11% | |
alveolar macrophage | 8 studies | 34% ± 7% | |
plasmacytoid dendritic cell | 8 studies | 25% ± 8% | |
leukocyte | 6 studies | 23% ± 2% | |
endothelial cell | 6 studies | 19% ± 1% | |
hematopoietic precursor cell | 5 studies | 27% ± 7% | |
ciliated cell | 5 studies | 21% ± 6% | |
mononuclear phagocyte | 5 studies | 43% ± 8% | |
epithelial cell | 5 studies | 28% ± 8% | |
hematopoietic stem cell | 5 studies | 32% ± 17% | |
secretory cell | 4 studies | 22% ± 7% | |
megakaryocyte | 4 studies | 38% ± 17% | |
fibroblast | 4 studies | 27% ± 7% | |
GABAergic neuron | 4 studies | 35% ± 15% | |
oligodendrocyte | 4 studies | 22% ± 5% | |
respiratory goblet cell | 3 studies | 25% ± 9% | |
common myeloid progenitor | 3 studies | 37% ± 14% | |
tissue-resident macrophage | 3 studies | 47% ± 3% | |
B cell | 3 studies | 17% ± 1% | |
intermediate monocyte | 3 studies | 44% ± 7% | |
inflammatory macrophage | 3 studies | 30% ± 8% | |
glutamatergic neuron | 3 studies | 50% ± 12% | |
basal cell | 3 studies | 31% ± 8% | |
neutrophil | 3 studies | 19% ± 3% | |
astrocyte | 3 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 4646.85 | 578 / 578 | 100% | 57.24 | 1155 / 1155 |
esophagus | 100% | 3465.96 | 1444 / 1445 | 100% | 43.67 | 183 / 183 |
breast | 100% | 3813.95 | 459 / 459 | 100% | 63.34 | 1117 / 1118 |
prostate | 100% | 2776.27 | 245 / 245 | 99% | 48.23 | 499 / 502 |
thymus | 100% | 3390.76 | 653 / 653 | 99% | 44.46 | 601 / 605 |
uterus | 100% | 2427.21 | 170 / 170 | 99% | 49.60 | 455 / 459 |
bladder | 100% | 3010.24 | 21 / 21 | 99% | 44.64 | 499 / 504 |
skin | 100% | 3445.17 | 1809 / 1809 | 99% | 52.69 | 466 / 472 |
pancreas | 99% | 1817.99 | 325 / 328 | 99% | 50.76 | 177 / 178 |
kidney | 100% | 2261.61 | 89 / 89 | 98% | 47.94 | 887 / 901 |
stomach | 100% | 2339.54 | 359 / 359 | 98% | 34.32 | 281 / 286 |
intestine | 100% | 2730.47 | 966 / 966 | 98% | 33.92 | 517 / 527 |
liver | 100% | 1762.27 | 226 / 226 | 98% | 30.25 | 397 / 406 |
adrenal gland | 100% | 4387.15 | 258 / 258 | 97% | 40.91 | 224 / 230 |
ovary | 98% | 2104.24 | 177 / 180 | 98% | 27.25 | 423 / 430 |
brain | 96% | 1336.71 | 2531 / 2642 | 100% | 42.44 | 703 / 705 |
adipose | 100% | 4402.55 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 62.48 | 29 / 29 |
spleen | 100% | 5036.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 61.07 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.49 | 1 / 1 |
blood vessel | 100% | 3336.05 | 1331 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3981.68 | 914 / 929 | 0% | 0 | 0 / 0 |
heart | 92% | 1728.42 | 794 / 861 | 0% | 0 | 0 / 0 |
muscle | 83% | 803.03 | 666 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 15.40 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035442 | Biological process | dipeptide transmembrane transport |
GO_0061462 | Biological process | protein localization to lysosome |
GO_0050821 | Biological process | protein stabilization |
GO_0005764 | Cellular component | lysosome |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0160178 | Molecular function | dipeptide uniporter activity |
Gene name | MFSD1 |
Protein name | Major facilitator superfamily domain-containing protein 1 Major facilitator superfamily domain containing 1 Major facilitator superfamily domain-containing protein 1 (Smooth muscle cell-associated protein 4) (SMAP-4) |
Synonyms | SMAP4 UG0581B09 |
Description | FUNCTION: Lysosomal transporter which is essential for liver homeostasis. Required to maintain stability and lysosomal localization of GLMP. . |
Accessions | Q9H3U5 ENST00000264266.12 [Q9H3U5-1] ENST00000471500.5 H7C593 ENST00000486568.5 ENST00000465739.5 A0A494C105 ENST00000471266.5 H7C5U3 ENST00000491804.1 ENST00000477743.1 C9JZW5 C9JAC3 ENST00000651862.1 H7C4F4 ENST00000474670.6 ENST00000622669.4 [Q9H3U5-6] ENST00000415822.8 [Q9H3U5-1] ENST00000480292.5 [Q9H3U5-2] C9J5G6 C9JCH3 ENST00000392813.8 [Q9H3U5-5] ENST00000482835.1 ENST00000484166.5 [Q9H3U5-2] C9JBA3 |