Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 38 studies | 65% ± 21% | |
smooth muscle cell | 22 studies | 48% ± 25% | |
connective tissue cell | 15 studies | 64% ± 22% | |
myofibroblast cell | 13 studies | 64% ± 27% | |
pericyte | 11 studies | 35% ± 11% | |
mesothelial cell | 4 studies | 29% ± 7% | |
adventitial cell | 4 studies | 68% ± 17% | |
Mueller cell | 3 studies | 35% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 90% | 19655.92 | 221 / 245 | 98% | 169.73 | 492 / 502 |
lung | 100% | 51147.13 | 577 / 578 | 83% | 128.10 | 963 / 1155 |
esophagus | 94% | 20392.24 | 1363 / 1445 | 74% | 90.10 | 136 / 183 |
breast | 93% | 17398.70 | 426 / 459 | 75% | 90.19 | 833 / 1118 |
intestine | 95% | 19963.07 | 914 / 966 | 73% | 88.20 | 383 / 527 |
bladder | 100% | 34944.38 | 21 / 21 | 65% | 73.84 | 330 / 504 |
ovary | 100% | 18108.33 | 180 / 180 | 62% | 93.90 | 265 / 430 |
uterus | 99% | 23766.64 | 169 / 170 | 52% | 159.89 | 238 / 459 |
stomach | 71% | 11575.90 | 254 / 359 | 76% | 148.56 | 218 / 286 |
thymus | 84% | 10014.13 | 547 / 653 | 42% | 40.58 | 252 / 605 |
skin | 70% | 10076.74 | 1259 / 1809 | 36% | 25.52 | 168 / 472 |
pancreas | 8% | 531.79 | 27 / 328 | 92% | 197.30 | 164 / 178 |
blood vessel | 100% | 61614.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 95% | 21907.86 | 1138 / 1204 | 0% | 0 | 0 / 0 |
kidney | 37% | 3934.03 | 33 / 89 | 42% | 54.89 | 379 / 901 |
heart | 70% | 9951.95 | 604 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 24% | 1538.64 | 62 / 258 | 43% | 97.95 | 98 / 230 |
lymph node | 0% | 0 | 0 / 0 | 59% | 36.53 | 17 / 29 |
brain | 0% | 23.29 | 9 / 2642 | 57% | 47.77 | 405 / 705 |
tonsil | 0% | 0 | 0 / 0 | 49% | 23.99 | 22 / 45 |
liver | 9% | 660.57 | 21 / 226 | 29% | 21.58 | 116 / 406 |
spleen | 18% | 1192.79 | 43 / 241 | 0% | 0 | 0 / 0 |
muscle | 11% | 758.22 | 89 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 10% | 4.11 | 8 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010712 | Biological process | regulation of collagen metabolic process |
GO_0097435 | Biological process | supramolecular fiber organization |
GO_0048251 | Biological process | elastic fiber assembly |
GO_0007155 | Biological process | cell adhesion |
GO_0009650 | Biological process | UV protection |
GO_0071493 | Biological process | cellular response to UV-B |
GO_0005615 | Cellular component | extracellular space |
GO_0001527 | Cellular component | microfibril |
GO_0071953 | Cellular component | elastic fiber |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0005201 | Molecular function | extracellular matrix structural constituent |
GO_0005515 | Molecular function | protein binding |
Gene name | MFAP4 |
Protein name | Microfibril-associated glycoprotein 4 Microfibril associated protein 4 |
Synonyms | |
Description | FUNCTION: Could be involved in calcium-dependent cell adhesion or intercellular interactions. May contribute to the elastic fiber assembly and/or maintenance . . |
Accessions | ENST00000299610.5 [P55083-1] ENST00000395592.6 [P55083-2] K7ES70 ENST00000497081.6 P55083 |