METRN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	42% ± 21%	Explore
astrocyte	15 studies	43% ± 21%	Explore
oligodendrocyte precursor cell	8 studies	35% ± 10%	Explore
oligodendrocyte	6 studies	28% ± 12%	Explore
endothelial cell	4 studies	24% ± 6%	Explore
abnormal cell	4 studies	28% ± 8%	Explore
epithelial cell	3 studies	28% ± 6%	Explore
Mueller cell	3 studies	36% ± 6%	Explore
neuron	3 studies	37% ± 1%	Explore
ependymal cell	3 studies	50% ± 20%	Explore
glial cell	3 studies	42% ± 28%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	27% ± 7%	Explore
eye	3 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	8374.01	2642 / 2642	100%	223.43	703 / 705
adrenal gland	97%	1523.78	249 / 258	85%	50.42	195 / 230
prostate	96%	1571.82	236 / 245	84%	22.16	424 / 502
thymus	96%	1722.61	626 / 653	75%	26.42	451 / 605
pancreas	93%	1187.33	306 / 328	70%	17.34	125 / 178
kidney	91%	1242.24	81 / 89	67%	22.06	607 / 901
breast	70%	720.85	322 / 459	86%	53.92	957 / 1118
skin	55%	957.17	999 / 1809	95%	84.53	450 / 472
intestine	81%	1394.15	781 / 966	53%	15.09	281 / 527
lung	73%	835.61	422 / 578	52%	13.06	596 / 1155
uterus	74%	874.67	125 / 170	50%	14.64	229 / 459
liver	71%	870.15	161 / 226	51%	13.99	207 / 406
stomach	73%	915.84	263 / 359	49%	13.90	140 / 286
bladder	76%	1392.76	16 / 21	43%	10.50	217 / 504
esophagus	70%	1499.38	1015 / 1445	44%	10.41	80 / 183
ureter	0%	0	0 / 0	100%	97.40	1 / 1
eye	0%	0	0 / 0	99%	38.80	79 / 80
ovary	8%	68.84	14 / 180	88%	40.66	379 / 430
heart	95%	1552.62	817 / 861	0%	0	0 / 0
blood vessel	90%	1182.61	1204 / 1335	0%	0	0 / 0
adipose	66%	694.48	795 / 1204	0%	0	0 / 0
spleen	46%	411.24	110 / 241	0%	0	0 / 0
muscle	36%	329.33	291 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	33%	9.50	15 / 45
lymph node	0%	0	0 / 0	10%	1.67	3 / 29
peripheral blood	1%	6.91	7 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0