Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 8 studies | 33% ± 12% | |
endothelial cell | 4 studies | 23% ± 6% | |
epithelial cell | 4 studies | 34% ± 12% | |
neuron | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 26% ± 6% | |
glutamatergic neuron | 3 studies | 39% ± 11% | |
basal cell | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 196.42 | 180 / 180 | 100% | 5.91 | 430 / 430 |
uterus | 100% | 190.31 | 170 / 170 | 100% | 5.67 | 459 / 459 |
esophagus | 100% | 227.66 | 1444 / 1445 | 100% | 5.00 | 183 / 183 |
breast | 100% | 195.56 | 459 / 459 | 100% | 4.58 | 1116 / 1118 |
bladder | 100% | 166.57 | 21 / 21 | 100% | 5.29 | 503 / 504 |
prostate | 100% | 193.48 | 245 / 245 | 100% | 5.06 | 501 / 502 |
thymus | 100% | 231.35 | 653 / 653 | 99% | 5.93 | 601 / 605 |
stomach | 100% | 136.95 | 359 / 359 | 99% | 4.39 | 284 / 286 |
brain | 99% | 213.13 | 2623 / 2642 | 100% | 6.91 | 704 / 705 |
lung | 99% | 179.51 | 573 / 578 | 100% | 5.51 | 1155 / 1155 |
kidney | 100% | 188.87 | 89 / 89 | 99% | 4.07 | 889 / 901 |
intestine | 100% | 160.01 | 966 / 966 | 98% | 4.41 | 518 / 527 |
adrenal gland | 100% | 321.78 | 258 / 258 | 98% | 6.04 | 226 / 230 |
skin | 100% | 254.42 | 1809 / 1809 | 98% | 4.29 | 463 / 472 |
liver | 100% | 123.62 | 225 / 226 | 96% | 2.76 | 391 / 406 |
pancreas | 96% | 85.90 | 315 / 328 | 99% | 4.21 | 177 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.17 | 29 / 29 |
spleen | 100% | 234.73 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.29 | 1 / 1 |
adipose | 100% | 182.43 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 151.09 | 1327 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 146.45 | 795 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 147.80 | 838 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 2.98 | 75 / 80 |
peripheral blood | 76% | 148.05 | 703 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0060173 | Biological process | limb development |
GO_0016567 | Biological process | protein ubiquitination |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0048147 | Biological process | negative regulation of fibroblast proliferation |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0016592 | Cellular component | mediator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0070847 | Cellular component | core mediator complex |
GO_0005634 | Cellular component | nucleus |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_0003712 | Molecular function | transcription coregulator activity |
Gene name | MED31 |
Protein name | Mediator of RNA polymerase II transcription subunit 31 (Mediator complex subunit 31) (Mediator complex subunit SOH1) (hSOH1) Mediator of RNA polymerase II transcription subunit 31 |
Synonyms | CGI-125 SOH1 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . |
Accessions | ENST00000575197.1 I3L2J1 Q9Y3C7 I3L0P8 ENST00000574128.1 ENST00000225728.8 |