Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 24% ± 5% | |
epithelial cell | 7 studies | 35% ± 16% | |
ciliated cell | 7 studies | 26% ± 8% | |
fibroblast | 5 studies | 26% ± 7% | |
CD4-positive, alpha-beta T cell | 4 studies | 22% ± 4% | |
abnormal cell | 4 studies | 27% ± 8% | |
basal cell | 4 studies | 24% ± 9% | |
conventional dendritic cell | 3 studies | 21% ± 4% | |
hematopoietic precursor cell | 3 studies | 23% ± 6% | |
retinal pigment epithelial cell | 3 studies | 38% ± 14% | |
erythroblast | 3 studies | 28% ± 10% | |
GABAergic neuron | 3 studies | 29% ± 4% | |
glutamatergic neuron | 3 studies | 35% ± 6% | |
CD8-positive, alpha-beta T cell | 3 studies | 18% ± 3% | |
dendritic cell | 3 studies | 29% ± 7% | |
pericyte | 3 studies | 21% ± 1% | |
natural killer cell | 3 studies | 17% ± 1% | |
regulatory T cell | 3 studies | 19% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 938.32 | 1445 / 1445 | 100% | 14.36 | 183 / 183 |
liver | 100% | 953.13 | 226 / 226 | 100% | 21.66 | 406 / 406 |
ovary | 100% | 1143.74 | 180 / 180 | 100% | 23.41 | 430 / 430 |
skin | 100% | 988.53 | 1809 / 1809 | 100% | 23.68 | 472 / 472 |
stomach | 100% | 732.33 | 359 / 359 | 100% | 19.13 | 286 / 286 |
kidney | 100% | 1018.08 | 89 / 89 | 100% | 17.45 | 900 / 901 |
thymus | 100% | 1112.12 | 653 / 653 | 100% | 19.30 | 604 / 605 |
uterus | 100% | 872.09 | 170 / 170 | 100% | 20.93 | 458 / 459 |
breast | 100% | 978.46 | 459 / 459 | 100% | 16.23 | 1114 / 1118 |
intestine | 100% | 939.48 | 966 / 966 | 100% | 21.30 | 525 / 527 |
bladder | 100% | 909.86 | 21 / 21 | 100% | 20.70 | 502 / 504 |
prostate | 100% | 702.03 | 245 / 245 | 100% | 15.88 | 500 / 502 |
lung | 99% | 822.86 | 575 / 578 | 100% | 20.00 | 1155 / 1155 |
brain | 99% | 733.02 | 2628 / 2642 | 100% | 20.92 | 705 / 705 |
pancreas | 99% | 511.88 | 326 / 328 | 100% | 15.65 | 178 / 178 |
adrenal gland | 100% | 1342.95 | 258 / 258 | 98% | 18.75 | 226 / 230 |
adipose | 100% | 985.80 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 16.82 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.26 | 29 / 29 |
muscle | 100% | 1614.73 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 752.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.20 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.68 | 1 / 1 |
blood vessel | 100% | 911.33 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1302.11 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 86% | 643.00 | 796 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090071 | Biological process | negative regulation of ribosome biogenesis |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0070130 | Biological process | negative regulation of mitochondrial translation |
GO_0017148 | Biological process | negative regulation of translation |
GO_0005829 | Cellular component | cytosol |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0043023 | Molecular function | ribosomal large subunit binding |
GO_0005515 | Molecular function | protein binding |
GO_0140978 | Molecular function | mitochondrial large ribosomal subunit binding |
Gene name | MALSU1 |
Protein name | Mitochondrial assembly of ribosomal large subunit protein 1 |
Synonyms | C7orf30 |
Description | FUNCTION: Required for normal mitochondrial ribosome function and mitochondrial translation . May play a role in ribosome biogenesis by preventing premature association of the 28S and 39S ribosomal subunits (Probable). Interacts with mitochondrial ribosomal protein uL14m (MRPL14), probably blocking formation of intersubunit bridge B8, preventing association of the 28S and 39S ribosomal subunits (Probable). Addition to isolated mitochondrial ribosomal subunits partially inhibits translation, probably by interfering with the association of the 28S and 39S ribosomal subunits and the formation of functional ribosomes (Probable). May also participate in the assembly and/or regulation of the stability of the large subunit of the mitochondrial ribosome . May function as a ribosomal silencing factor (Probable). . |
Accessions | ENST00000466681.2 Q96EH3 |