Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 27% ± 8% | |
epithelial cell | 12 studies | 38% ± 12% | |
vein endothelial cell | 10 studies | 27% ± 11% | |
type II pneumocyte | 9 studies | 53% ± 20% | |
type I pneumocyte | 8 studies | 29% ± 11% | |
enterocyte | 7 studies | 54% ± 14% | |
basal cell | 7 studies | 31% ± 11% | |
endothelial cell of artery | 6 studies | 30% ± 10% | |
club cell | 6 studies | 31% ± 15% | |
secretory cell | 5 studies | 42% ± 10% | |
progenitor cell | 4 studies | 26% ± 4% | |
endothelial cell of vascular tree | 4 studies | 23% ± 5% | |
squamous epithelial cell | 3 studies | 58% ± 16% | |
capillary endothelial cell | 3 studies | 31% ± 10% | |
luminal cell of prostate epithelium | 3 studies | 27% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 95% | 500.58 | 549 / 578 | 88% | 22.72 | 1013 / 1155 |
thymus | 98% | 258.28 | 639 / 653 | 72% | 12.33 | 436 / 605 |
esophagus | 85% | 1799.96 | 1223 / 1445 | 85% | 22.14 | 156 / 183 |
intestine | 82% | 720.68 | 788 / 966 | 88% | 13.54 | 462 / 527 |
bladder | 90% | 243.29 | 19 / 21 | 62% | 10.77 | 312 / 504 |
prostate | 84% | 150.75 | 205 / 245 | 62% | 4.48 | 311 / 502 |
uterus | 64% | 105.55 | 109 / 170 | 64% | 13.67 | 294 / 459 |
stomach | 38% | 46.49 | 135 / 359 | 83% | 11.76 | 238 / 286 |
breast | 95% | 202.22 | 437 / 459 | 23% | 1.82 | 256 / 1118 |
pancreas | 13% | 14.44 | 42 / 328 | 83% | 17.20 | 148 / 178 |
adipose | 95% | 238.58 | 1146 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 17.72 | 40 / 45 |
skin | 79% | 386.19 | 1428 / 1809 | 8% | 0.54 | 36 / 472 |
kidney | 34% | 32.99 | 30 / 89 | 46% | 4.14 | 415 / 901 |
heart | 77% | 100.33 | 661 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 68% | 103.92 | 913 / 1335 | 0% | 0 | 0 / 0 |
ovary | 9% | 9.01 | 17 / 180 | 22% | 1.57 | 93 / 430 |
adrenal gland | 10% | 9.38 | 25 / 258 | 2% | 0.09 | 5 / 230 |
spleen | 12% | 9.59 | 28 / 241 | 0% | 0 | 0 / 0 |
muscle | 10% | 9.13 | 84 / 803 | 0% | 0 | 0 / 0 |
liver | 1% | 0.58 | 2 / 226 | 4% | 0.51 | 18 / 406 |
eye | 0% | 0 | 0 / 0 | 5% | 0.38 | 4 / 80 |
brain | 2% | 2.85 | 66 / 2642 | 0% | 0.01 | 2 / 705 |
peripheral blood | 0% | 0.36 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042632 | Biological process | cholesterol homeostasis |
GO_0042552 | Biological process | myelination |
GO_0045121 | Cellular component | membrane raft |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030136 | Cellular component | clathrin-coated vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
GO_0019911 | Molecular function | structural constituent of myelin sheath |
Gene name | MALL |
Protein name | Mal, T cell differentiation protein like MAL-like protein (Protein BENE) |
Synonyms | BENE |
Description | |
Accessions | Q13021 C9IZ55 ENST00000424988.1 ENST00000272462.3 ENST00000427178.1 F8WE57 |