Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 39 studies | 61% ± 22% | |
classical monocyte | 29 studies | 77% ± 18% | |
conventional dendritic cell | 29 studies | 73% ± 16% | |
monocyte | 27 studies | 71% ± 25% | |
non-classical monocyte | 27 studies | 91% ± 13% | |
dendritic cell | 26 studies | 58% ± 22% | |
neutrophil | 16 studies | 64% ± 23% | |
myeloid cell | 14 studies | 62% ± 16% | |
plasmacytoid dendritic cell | 11 studies | 27% ± 11% | |
mononuclear phagocyte | 8 studies | 62% ± 29% | |
innate lymphoid cell | 8 studies | 50% ± 22% | |
mucosal invariant T cell | 8 studies | 23% ± 5% | |
microglial cell | 8 studies | 51% ± 27% | |
alveolar macrophage | 7 studies | 48% ± 16% | |
leukocyte | 7 studies | 47% ± 20% | |
intermediate monocyte | 6 studies | 81% ± 14% | |
hematopoietic stem cell | 5 studies | 25% ± 10% | |
group 3 innate lymphoid cell | 5 studies | 69% ± 12% | |
T cell | 4 studies | 23% ± 7% | |
hematopoietic precursor cell | 4 studies | 55% ± 14% | |
inflammatory macrophage | 4 studies | 57% ± 21% | |
Langerhans cell | 3 studies | 66% ± 27% | |
monocyte-derived dendritic cell | 3 studies | 83% ± 14% | |
pro-B cell | 3 studies | 27% ± 2% | |
tissue-resident macrophage | 3 studies | 48% ± 21% | |
erythrocyte | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 1196.94 | 578 / 578 | 91% | 18.87 | 1055 / 1155 |
breast | 89% | 187.08 | 410 / 459 | 91% | 13.57 | 1022 / 1118 |
brain | 71% | 216.17 | 1877 / 2642 | 98% | 25.36 | 690 / 705 |
kidney | 76% | 175.79 | 68 / 89 | 90% | 21.55 | 812 / 901 |
intestine | 88% | 222.28 | 849 / 966 | 73% | 8.64 | 384 / 527 |
prostate | 89% | 239.47 | 218 / 245 | 71% | 6.44 | 357 / 502 |
liver | 81% | 187.48 | 183 / 226 | 72% | 8.78 | 294 / 406 |
adrenal gland | 96% | 263.32 | 248 / 258 | 54% | 5.29 | 125 / 230 |
uterus | 64% | 95.48 | 108 / 170 | 83% | 12.42 | 382 / 459 |
thymus | 62% | 107.74 | 404 / 653 | 84% | 16.84 | 508 / 605 |
skin | 61% | 110.74 | 1107 / 1809 | 84% | 16.28 | 395 / 472 |
bladder | 67% | 213.00 | 14 / 21 | 67% | 10.45 | 336 / 504 |
stomach | 54% | 93.05 | 193 / 359 | 79% | 10.44 | 225 / 286 |
esophagus | 57% | 90.17 | 826 / 1445 | 62% | 5.73 | 113 / 183 |
ovary | 35% | 46.53 | 63 / 180 | 81% | 11.55 | 350 / 430 |
pancreas | 25% | 44.60 | 82 / 328 | 90% | 19.43 | 161 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 56.14 | 29 / 29 |
spleen | 100% | 4621.36 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 7680.01 | 926 / 929 | 0% | 0 | 0 / 0 |
adipose | 94% | 317.21 | 1135 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 18.34 | 40 / 45 |
blood vessel | 80% | 203.90 | 1072 / 1335 | 0% | 0 | 0 / 0 |
heart | 57% | 93.02 | 487 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 39% | 4.10 | 31 / 80 |
muscle | 4% | 3.91 | 31 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006955 | Biological process | immune response |
GO_0008360 | Biological process | regulation of cell shape |
GO_0000902 | Biological process | cell morphogenesis |
GO_0050672 | Biological process | negative regulation of lymphocyte proliferation |
GO_0016358 | Biological process | dendrite development |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
Gene name | LST1 |
Protein name | Leukocyte specific transcript 1, isoform CRA_c (Leukocyte-specific transcript 1 protein) Leukocyte specific transcript 1 Leukocyte specific transcript 1 (Leukocyte-specific transcript 1 protein) Leukocyte-specific transcript 1 protein (Protein B144) Leukocyte-specific transcript 1 protein LST1/O (Leukocyte specific transcript 1) |
Synonyms | hCG_43689 B144 |
Description | FUNCTION: Possible role in modulating immune responses. Induces morphological changes including production of filopodia and microspikes when overexpressed in a variety of cell types and may be involved in dendritic cell maturation. Isoform 1 and isoform 2 have an inhibitory effect on lymphocyte proliferation. . |
Accessions | ENST00000418507.6 [O00453-10] ENST00000453818.5 ENST00000428227.5 [O00453-10] ENST00000339530.8 [O00453-12] ENST00000450425.6 [O00453-10] ENST00000441641.5 ENST00000430632.5 [O00453-1] ENST00000376089.6 [O00453-10] ENST00000441278.5 ENST00000400257.5 [O00453-9] ENST00000422035.5 [O00453-6] A0A024RCT7 ENST00000438075.7 [O00453-1] ENST00000429792.5 ENST00000433520.5 ENST00000433188.5 ENST00000376092.7 [O00453-8] ENST00000376093.6 [O00453-11] ENST00000455426.6 [O00453-10] ENST00000438381.5 [O00453-12] ENST00000412125.1 ENST00000439436.5 ENST00000412041.5 [O00453-11] ENST00000429910.5 [O00453-5] A0A0G2JHS1 ENST00000449388.5 ENST00000490742.5 ENST00000411490.5 [O00453-1] ENST00000414519.1 ENST00000443051.5 ENST00000415262.1 ENST00000448618.5 ENST00000415419.5 [O00453-6] ENST00000420142.1 ENST00000450291.5 [O00453-13] ENST00000437812.5 [O00453-11] ENST00000440328.5 [O00453-8] ENST00000458456.5 [O00453-9] ENST00000446239.5 [O00453-6] ENST00000443931.5 ENST00000414821.5 ENST00000412931.5 ENST00000430680.5 [O00453-12] ENST00000420157.5 [O00453-10] ENST00000449236.5 [O00453-10] ENST00000457549.5 [O00453-13] ENST00000433420.1 ENST00000453995.6 [O00453-1] H7C4M3 Q2HNT4 ENST00000432009.6 [O00453-10] ENST00000427164.5 ENST00000435428.5 ENST00000400265.5 [O00453-6] ENST00000444783.5 ENST00000448381.5 ENST00000413900.5 ENST00000428405.5 [O00453-10] ENST00000440323.5 [O00453-10] ENST00000400251.5 ENST00000383480.6 [O00453-13] ENST00000400261.5 A0A0G2JIN5 ENST00000400250.5 [O00453-5] ENST00000211921.11 ENST00000452762.5 ENST00000427186.5 [O00453-8] ENST00000443340.6 [O00453-1] ENST00000455901.6 [O00453-1] ENST00000448441.6 [O00453-10] ENST00000449799.5 ENST00000396112.6 ENST00000437137.6 [O00453-1] ENST00000436185.5 [O00453-10] ENST00000400252.5 ENST00000441216.5 ENST00000429874.5 [O00453-1] ENST00000436037.5 [O00453-11] ENST00000438349.5 [O00453-6] ENST00000415490.5 [O00453-8] ENST00000400262.5 [O00453-10] F2Z2M1 ENST00000437436.5 [O00453-6] ENST00000440242.5 [O00453-13] ENST00000430997.5 [O00453-5] ENST00000448749.5 ENST00000433492.5 ENST00000425260.5 ENST00000451371.5 ENST00000376110.7 [O00453-6] ENST00000376096.5 [O00453-9] ENST00000436969.5 ENST00000421478.5 ENST00000420333.5 [O00453-5] ENST00000451922.5 [O00453-13] ENST00000418796.1 ENST00000447391.5 [O00453-10] ENST00000376099.5 ENST00000420797.5 [O00453-10] ENST00000434314.6 [O00453-1] ENST00000426298.5 ENST00000433305.5 [O00453-8] ENST00000447512.5 ENST00000417428.5 [O00453-1] ENST00000438335.5 [O00453-11] ENST00000440253.5 [O00453-10] ENST00000303757.12 [O00453-5] A0A0G2JIG4 ENST00000454186.5 H7C4Z3 ENST00000451641.5 [O00453-12] ENST00000455052.5 [O00453-10] ENST00000464044.1 ENST00000452169.5 [O00453-12] ENST00000396101.7 ENST00000376086.7 [O00453-13] ENST00000400264.5 [O00453-1] ENST00000421781.5 ENST00000400263.5 [O00453-10] ENST00000415781.5 [O00453-9] ENST00000442915.5 ENST00000420785.5 [O00453-12] ENST00000412623.1 [O00453-11] ENST00000455003.5 [O00453-1] ENST00000414266.5 [O00453-10] ENST00000455493.5 [O00453-9] ENST00000455553.1 ENST00000443655.5 [O00453-5] ENST00000427507.6 [O00453-1] ENST00000418551.5 ENST00000425495.5 O00453 ENST00000383484.6 [O00453-12] ENST00000383482.2 [O00453-8] ENST00000425760.5 [O00453-8] ENST00000412283.5 ENST00000400255.5 ENST00000429639.5 ENST00000443741.6 [O00453-1] ENST00000449273.5 [O00453-5] ENST00000423871.5 [O00453-6] Q5HYT5 ENST00000376090.6 ENST00000426938.5 [O00453-1] ENST00000455346.5 ENST00000433004.5 [O00453-10] ENST00000413426.5 [O00453-9] ENST00000455655.6 [O00453-10] ENST00000433676.6 [O00453-10] ENST00000432164.5 [O00453-8] ENST00000453586.5 ENST00000454168.5 [O00453-13] ENST00000430818.5 ENST00000453830.5 ENST00000448633.1 ENST00000448236.5 [O00453-11] ENST00000400253.5 ENST00000383486.6 [O00453-11] ENST00000447141.5 [O00453-9] ENST00000428898.5 [O00453-9] ENST00000420676.5 [O00453-13] ENST00000450047.5 ENST00000442052.5 [O00453-12] ENST00000423107.6 [O00453-10] ENST00000422533.5 [O00453-5] ENST00000419469.5 ENST00000419521.5 Q5STB1 ENST00000426202.5 |