LRRTM1 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of LRRTM1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	86%	1169.03	2279 / 2642	84%	8.44	590 / 705
ovary	7%	12.54	12 / 180	90%	50.25	387 / 430
intestine	71%	288.08	684 / 966	4%	0.29	20 / 527
adrenal gland	12%	26.66	31 / 258	49%	5.56	112 / 230
esophagus	58%	184.61	839 / 1445	2%	0.55	4 / 183
thymus	41%	173.89	268 / 653	19%	1.90	114 / 605
prostate	49%	115.11	120 / 245	0%	0.01	2 / 502
uterus	26%	64.47	45 / 170	17%	4.14	76 / 459
bladder	33%	60.10	7 / 21	2%	0.08	9 / 504
stomach	24%	61.96	85 / 359	4%	0.62	11 / 286
heart	26%	50.69	225 / 861	0%	0	0 / 0
kidney	11%	15.43	10 / 89	8%	2.87	68 / 901
skin	1%	0.90	16 / 1809	13%	1.98	60 / 472
pancreas	0%	0.27	1 / 328	11%	1.30	20 / 178
adipose	11%	18.83	131 / 1204	0%	0	0 / 0
lung	0%	0	0 / 578	8%	0.74	88 / 1155
blood vessel	5%	8.41	61 / 1335	0%	0	0 / 0
liver	3%	3.65	7 / 226	1%	0.04	5 / 406
breast	2%	2.71	10 / 459	0%	0.02	3 / 1118
eye	0%	0	0 / 0	1%	0.03	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0031623	Biological process	receptor internalization
GO_0035640	Biological process	exploration behavior
GO_1905606	Biological process	regulation of presynapse assembly
GO_0060291	Biological process	long-term synaptic potentiation
GO_0008150	Biological process	biological_process
GO_0051649	Biological process	establishment of localization in cell
GO_0007626	Biological process	locomotory behavior
GO_0002091	Biological process	negative regulation of receptor internalization
GO_0035418	Biological process	protein localization to synapse
GO_0050808	Biological process	synapse organization
GO_0051965	Biological process	positive regulation of synapse assembly
GO_0099151	Biological process	regulation of postsynaptic density assembly
GO_0098978	Cellular component	glutamatergic synapse
GO_0005615	Cellular component	extracellular space
GO_0031012	Cellular component	extracellular matrix
GO_0098982	Cellular component	GABA-ergic synapse
GO_0009986	Cellular component	cell surface
GO_0005783	Cellular component	endoplasmic reticulum
GO_0030426	Cellular component	growth cone
GO_0060076	Cellular component	excitatory synapse
GO_0030424	Cellular component	axon
GO_0099634	Cellular component	postsynaptic specialization membrane
GO_0003674	Molecular function	molecular_function

Gene name	LRRTM1
Protein name	Leucine rich repeat transmembrane neuronal 1 Leucine-rich repeat transmembrane neuronal protein 1
Synonyms	UNQ675/PRO1309
Description	FUNCTION: Exhibits strong synaptogenic activity, restricted to excitatory presynaptic differentiation, acting at both pre- and postsynaptic level. . FUNCTION: Exhibits strong synaptogenic activity, restricted to excitatory presynaptic differentiation, acting at both pre- and postsynaptic level. . FUNCTION: Exhibits strong synaptogenic activity, restricted to excitatory presynaptic differentiation, acting at both pre- and postsynaptic level. .
Accessions	ENST00000417012.5 ENST00000416268.1 C9JF97 ENST00000415098.1 C9JEE2 Q86UE6 ENST00000295057.4 ENST00000409148.1 C9JPM9 ENST00000433224.1 ENST00000452811.1

LRRTM1 report