LRRIQ1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	21 studies	79% ± 17%	Explore
retinal rod cell	8 studies	38% ± 12%	Explore
retinal cone cell	7 studies	51% ± 16%	Explore
deuterosomal cell	4 studies	53% ± 5%	Explore
glutamatergic neuron	4 studies	42% ± 10%	Explore
astrocyte	4 studies	35% ± 22%	Explore
epithelial cell	3 studies	29% ± 14%	Explore
ependymal cell	3 studies	74% ± 10%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	5 studies	30% ± 11%	Explore
brain	4 studies	31% ± 14%	Explore
lung	3 studies	24% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	92%	130.77	226 / 245	75%	2.27	379 / 502
kidney	100%	187.79	89 / 89	51%	1.31	456 / 901
thymus	100%	234.59	653 / 653	23%	0.40	140 / 605
lung	86%	280.87	496 / 578	26%	0.84	306 / 1155
uterus	88%	112.38	150 / 170	20%	0.76	93 / 459
ovary	47%	25.23	84 / 180	55%	1.88	237 / 430
brain	85%	154.70	2247 / 2642	9%	0.44	60 / 705
breast	61%	42.74	281 / 459	25%	0.59	276 / 1118
pancreas	69%	30.25	226 / 328	10%	0.28	18 / 178
esophagus	29%	11.68	425 / 1445	15%	0.40	28 / 183
intestine	39%	18.07	374 / 966	3%	0.08	17 / 527
bladder	29%	10.81	6 / 21	9%	0.18	43 / 504
skin	30%	14.21	534 / 1809	3%	0.08	16 / 472
stomach	23%	8.96	81 / 359	5%	0.10	13 / 286
tonsil	0%	0	0 / 0	20%	0.42	9 / 45
adrenal gland	12%	4.27	30 / 258	7%	0.11	17 / 230
adipose	14%	4.91	163 / 1204	0%	0	0 / 0
heart	11%	3.33	92 / 861	0%	0	0 / 0
spleen	10%	3.04	23 / 241	0%	0	0 / 0
liver	1%	0.27	2 / 226	4%	0.07	17 / 406
blood vessel	4%	1.22	49 / 1335	0%	0	0 / 0
muscle	0%	0.44	3 / 803	0%	0	0 / 0
peripheral blood	0%	0.42	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1