LRRC40 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	5 studies	38% ± 12%	Explore
astrocyte	5 studies	25% ± 9%	Explore
endothelial cell	4 studies	23% ± 10%	Explore
glutamatergic neuron	4 studies	51% ± 15%	Explore
interneuron	4 studies	36% ± 18%	Explore
oligodendrocyte	4 studies	20% ± 5%	Explore
epithelial cell	3 studies	23% ± 4%	Explore
oligodendrocyte precursor cell	3 studies	23% ± 5%	Explore
neuron	3 studies	25% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	34% ± 16%	Explore
liver	3 studies	19% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	757.95	1445 / 1445	100%	23.43	183 / 183
ovary	100%	781.48	180 / 180	100%	17.99	430 / 430
brain	100%	981.87	2638 / 2642	100%	27.65	705 / 705
lung	99%	728.51	575 / 578	100%	21.72	1155 / 1155
breast	100%	885.28	459 / 459	99%	22.33	1104 / 1118
thymus	100%	693.42	652 / 653	98%	14.67	593 / 605
bladder	100%	712.14	21 / 21	98%	17.41	493 / 504
uterus	100%	855.02	170 / 170	98%	21.82	448 / 459
kidney	100%	622.12	89 / 89	97%	20.73	874 / 901
stomach	100%	548.95	359 / 359	97%	16.88	277 / 286
prostate	100%	612.84	244 / 245	97%	18.08	487 / 502
intestine	100%	803.83	966 / 966	96%	15.09	508 / 527
pancreas	98%	363.44	320 / 328	97%	13.49	173 / 178
liver	100%	765.81	226 / 226	91%	11.91	370 / 406
adrenal gland	100%	722.02	258 / 258	90%	9.89	207 / 230
skin	100%	908.26	1805 / 1809	90%	17.68	425 / 472
adipose	100%	924.59	1204 / 1204	0%	0	0 / 0
blood vessel	100%	789.13	1335 / 1335	0%	0	0 / 0
spleen	100%	711.34	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	6.16	1 / 1
muscle	100%	518.70	802 / 803	0%	0	0 / 0
heart	98%	546.76	845 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	19.46	44 / 45
lymph node	0%	0	0 / 0	86%	17.53	25 / 29
peripheral blood	59%	599.28	549 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	43%	3.93	34 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0