Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 7 studies | 25% ± 7% | |
| endothelial cell | 5 studies | 28% ± 10% | |
| epithelial cell | 5 studies | 23% ± 9% | |
| GABAergic neuron | 5 studies | 32% ± 13% | |
| astrocyte | 5 studies | 27% ± 9% | |
| oligodendrocyte precursor cell | 5 studies | 27% ± 10% | |
| type I pneumocyte | 5 studies | 26% ± 4% | |
| Mueller cell | 4 studies | 22% ± 2% | |
| glutamatergic neuron | 4 studies | 42% ± 13% | |
| macrophage | 4 studies | 21% ± 3% | |
| microglial cell | 3 studies | 22% ± 2% | |
| B cell | 3 studies | 18% ± 3% | |
| fibroblast | 3 studies | 25% ± 6% | |
| goblet cell | 3 studies | 24% ± 11% | |
| adipocyte | 3 studies | 18% ± 1% | |
| interneuron | 3 studies | 38% ± 19% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 6 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1466.64 | 1445 / 1445 | 99% | 8.79 | 182 / 183 |
| prostate | 100% | 1970.11 | 245 / 245 | 99% | 6.26 | 498 / 502 |
| brain | 99% | 1336.59 | 2626 / 2642 | 100% | 8.16 | 703 / 705 |
| breast | 100% | 2028.37 | 459 / 459 | 99% | 7.37 | 1107 / 1118 |
| thymus | 100% | 2484.30 | 653 / 653 | 99% | 8.16 | 599 / 605 |
| intestine | 100% | 1924.47 | 966 / 966 | 99% | 5.40 | 520 / 527 |
| ovary | 100% | 2622.56 | 180 / 180 | 99% | 6.64 | 424 / 430 |
| uterus | 100% | 2416.52 | 170 / 170 | 98% | 6.03 | 451 / 459 |
| bladder | 100% | 1812.48 | 21 / 21 | 98% | 5.17 | 494 / 504 |
| lung | 100% | 1781.89 | 578 / 578 | 98% | 5.74 | 1128 / 1155 |
| pancreas | 100% | 928.98 | 327 / 328 | 98% | 5.48 | 174 / 178 |
| stomach | 100% | 1197.34 | 359 / 359 | 97% | 5.94 | 278 / 286 |
| skin | 100% | 2437.17 | 1809 / 1809 | 94% | 5.87 | 444 / 472 |
| kidney | 100% | 1281.49 | 89 / 89 | 92% | 5.06 | 829 / 901 |
| adrenal gland | 100% | 1362.55 | 258 / 258 | 89% | 3.56 | 204 / 230 |
| liver | 98% | 769.93 | 222 / 226 | 46% | 1.65 | 187 / 406 |
| adipose | 100% | 1833.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2264.98 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 3.48 | 1 / 1 |
| blood vessel | 100% | 1410.15 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1089.74 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 1051.20 | 846 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 5.62 | 44 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 86% | 4.40 | 25 / 29 |
| eye | 0% | 0 | 0 / 0 | 79% | 3.72 | 63 / 80 |
| peripheral blood | 71% | 626.43 | 662 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007605 | Biological process | sensory perception of sound |
| GO_0048681 | Biological process | negative regulation of axon regeneration |
| GO_0051045 | Biological process | negative regulation of membrane protein ectodomain proteolysis |
| GO_0010640 | Biological process | regulation of platelet-derived growth factor receptor signaling pathway |
| GO_0060384 | Biological process | innervation |
| GO_0034394 | Biological process | protein localization to cell surface |
| GO_2001222 | Biological process | regulation of neuron migration |
| GO_0006509 | Biological process | membrane protein ectodomain proteolysis |
| GO_2000010 | Biological process | positive regulation of protein localization to cell surface |
| GO_0005615 | Cellular component | extracellular space |
| GO_0097708 | Cellular component | intracellular vesicle |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0030426 | Cellular component | growth cone |
| GO_0031012 | Cellular component | extracellular matrix |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005102 | Molecular function | signaling receptor binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | LRIG2 |
| Protein name | Leucine-rich repeats and immunoglobulin-like domains protein 2 (LIG-2) |
| Synonyms | KIAA0806 LIG2 |
| Description | |
| Accessions | ENST00000361127.6 O94898 |