Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 7 studies | 25% ± 7% | |
endothelial cell | 5 studies | 28% ± 10% | |
epithelial cell | 5 studies | 23% ± 9% | |
GABAergic neuron | 5 studies | 32% ± 13% | |
astrocyte | 5 studies | 27% ± 9% | |
oligodendrocyte precursor cell | 5 studies | 27% ± 10% | |
type I pneumocyte | 5 studies | 26% ± 4% | |
Mueller cell | 4 studies | 22% ± 2% | |
glutamatergic neuron | 4 studies | 42% ± 13% | |
macrophage | 4 studies | 21% ± 3% | |
microglial cell | 3 studies | 22% ± 2% | |
B cell | 3 studies | 18% ± 3% | |
fibroblast | 3 studies | 25% ± 6% | |
goblet cell | 3 studies | 24% ± 11% | |
adipocyte | 3 studies | 18% ± 1% | |
interneuron | 3 studies | 38% ± 19% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1466.64 | 1445 / 1445 | 99% | 8.79 | 182 / 183 |
prostate | 100% | 1970.11 | 245 / 245 | 99% | 6.26 | 498 / 502 |
brain | 99% | 1336.59 | 2626 / 2642 | 100% | 8.16 | 703 / 705 |
breast | 100% | 2028.37 | 459 / 459 | 99% | 7.37 | 1107 / 1118 |
thymus | 100% | 2484.30 | 653 / 653 | 99% | 8.16 | 599 / 605 |
intestine | 100% | 1924.47 | 966 / 966 | 99% | 5.40 | 520 / 527 |
ovary | 100% | 2622.56 | 180 / 180 | 99% | 6.64 | 424 / 430 |
uterus | 100% | 2416.52 | 170 / 170 | 98% | 6.03 | 451 / 459 |
bladder | 100% | 1812.48 | 21 / 21 | 98% | 5.17 | 494 / 504 |
lung | 100% | 1781.89 | 578 / 578 | 98% | 5.74 | 1128 / 1155 |
pancreas | 100% | 928.98 | 327 / 328 | 98% | 5.48 | 174 / 178 |
stomach | 100% | 1197.34 | 359 / 359 | 97% | 5.94 | 278 / 286 |
skin | 100% | 2437.17 | 1809 / 1809 | 94% | 5.87 | 444 / 472 |
kidney | 100% | 1281.49 | 89 / 89 | 92% | 5.06 | 829 / 901 |
adrenal gland | 100% | 1362.55 | 258 / 258 | 89% | 3.56 | 204 / 230 |
liver | 98% | 769.93 | 222 / 226 | 46% | 1.65 | 187 / 406 |
adipose | 100% | 1833.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2264.98 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.48 | 1 / 1 |
blood vessel | 100% | 1410.15 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1089.74 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1051.20 | 846 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 5.62 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 86% | 4.40 | 25 / 29 |
eye | 0% | 0 | 0 / 0 | 79% | 3.72 | 63 / 80 |
peripheral blood | 71% | 626.43 | 662 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007605 | Biological process | sensory perception of sound |
GO_0048681 | Biological process | negative regulation of axon regeneration |
GO_0051045 | Biological process | negative regulation of membrane protein ectodomain proteolysis |
GO_0010640 | Biological process | regulation of platelet-derived growth factor receptor signaling pathway |
GO_0060384 | Biological process | innervation |
GO_0034394 | Biological process | protein localization to cell surface |
GO_2001222 | Biological process | regulation of neuron migration |
GO_0006509 | Biological process | membrane protein ectodomain proteolysis |
GO_2000010 | Biological process | positive regulation of protein localization to cell surface |
GO_0005615 | Cellular component | extracellular space |
GO_0097708 | Cellular component | intracellular vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0030426 | Cellular component | growth cone |
GO_0031012 | Cellular component | extracellular matrix |
GO_0005737 | Cellular component | cytoplasm |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | LRIG2 |
Protein name | Leucine-rich repeats and immunoglobulin-like domains protein 2 (LIG-2) |
Synonyms | KIAA0806 LIG2 |
Description | |
Accessions | ENST00000361127.6 O94898 |